数据工具

【ETL工具】精选的ETL(提取,转换,加载)框架,库和软件的精选列表。

Chinese, Simplified

awesome-etl

A curated list of notable ETL (extract, transform, load) frameworks, libraries and software.

Related Lists

Workflow Management/Engines

  • Airflow - "Use airflow to author workflows as directed acyclic graphs (DAGs) of tasks. The airflow scheduler executes your tasks on an array of workers while following the specified dependencies. Rich command line utilities make performing complex surgeries on DAGs a snap. The rich user interface makes it easy to visualize pipelines running in production, monitor progress, and troubleshoot issues when needed."
  • Azkaban - "a batch workflow job scheduler created at LinkedIn to run Hadoop jobs. Azkaban resolves the ordering through job dependencies and provides an easy to use web user interface to maintain and track your workflows."
  • Dray.it - "Docker workflow engine. Allows users to separate a workflow into discrete steps each to be handled by a single container."
  • Luigi - "a Python module that helps you build complex pipelines of batch jobs. It handles dependency resolution, workflow management, visualization etc. It also comes with Hadoop support built in."
  • Mara - "A lightweight opinionated ETL framework, halfway between plain scripts and Apache Airflow"
  • Pinball - "a scalable workflow management platform developed at Pinterest. It is built based on layered approach."
  • TaskFlow - "allows the creation of lightweight task objects and/or functions that are combined together into flows (aka: workflows) in a declarative manner. It includes engines for running these flows in a manner that can be stopped, resumed, and safely reverted."
  • Toil - Similar to Luigi, jobs are classes with a run method. Supports executing jobs on other machines (workers) which can include AWS spot instances.

Job Scheduling

  • Chronos - "a distributed and fault-tolerant scheduler that runs on top of Apache Mesos that can be used for job orchestration."
  • Dagobah - "a simple dependency-based job scheduler written in Python. Dagobah allows you to schedule periodic jobs using Cron syntax. Each job then kicks off a series of tasks (subprocesses) in an order defined by a dependency graph you can easily draw with click-and-drag in the web interface."
  • Jenkins - "the leading open-source automation server. Built with Java, it provides over 1000 plugins to support automating virtually anything, so that humans can actually spend their time doing things machines cannot."

Java

  • GETL - Groovy toolbox for ETL Tasks from practicing architectures
  • JSR 352 - Java native API for batch processing
  • Scriptella - Java-XML ETL toolbox for every day use.
  • Spring Batch - ETL on Spring ecosystem

Python

Libraries

  • BeautifulSoup - Popular library used to extract data from web pages.
  • Blaze - "translates a subset of modified NumPy and Pandas-like syntax to databases and other computing systems."
  • Bonobo - Simple, modern and atomic data transformation graphs for Python 3.5+.
  • Bubbles - "a Python ETL Framework and set of tools. It can be used for processing, auditing and inspecting data. Focus is on understandability and transparency of the process."
  • Celery - "an asynchronous task queue/job queue based on distributed message passing. It is focused on real-time operation, but supports scheduling as well."
  • Dask - Ever tried using Pandas to process data that won't fit into memory? Dask makes it easy. Dask also has functionality to make it easy to processing continuous streams of data.
  • dataset - A wrapper around SQLAlchemy that simplifies database operations (including upserting).
  • ijson - Allows processing JSON iteratively (as a stream) without loading the whole file into memory at once.
  • Joblib - "a set of tools to provide lightweight pipelining in Python."
  • lxml - Parses XML using C libraries libxml2 and libxslt, so it's very fast. Also supports a "recover" mode that will try its best to use invalid xml or discard it. Great for large XML files and advanced functionality (like using xpaths). IBM also has a great article on high-performance parsing with lxml here: http://www.ibm.com/developerworks/library/x-hiperfparse/
  • MrJob - "lets you write MapReduce jobs in Python 2.6+ and run them on several platforms. The easiest route to writing Python programs that run on Hadoop."
  • Odo - Moves data across containers (SQL, CSV, MongoDB, Pandas, etc). Claims to be the easiest and fastest way to load a CSV into your database.
  • Pandas - Implements dataframes in Python for easier data processing and includes a number of tools that make it easier to extract data from multiple file formats.
  • parse - The opposite of Python's format(). Easier to use than regex, but more limited.
  • PETL - "a general purpose Python package for extracting, transforming and loading tables of data." Slower than Pandas and not as good for larger amounts of data, but simpler.
  • PyQuery - Extracts data from web pages with a jquery-like syntax.
  • Retrying - Allows you to add a decorator to any function/method to retry on an exception.
  • Requests-HTML - Combines PyQuery, Requests, parse, and other libraries for a pleasant and intuitive web scraping experience.
  • riko - A python stream processing engine modeled after Yahoo! Pipes.
  • Ruffus - "The Ruffus module is a lightweight way to add support for running computational pipelines."
  • SQLAlchemy - "the Python SQL toolkit and Object Relational Mapper that gives application developers the full power and flexibility of SQL."
  • Toolz - "A functional standard library for python." Includes a pipe function that allows you to pipe a value through a sequence of functions. There's also a cython implementation here: https://github.com/pytoolz/cytoolz
  • xmltodict - Makes working with XML as easy as working with JSON. Also allows streaming so you don't run out of memory on large XML files. Great for simple operations on small XML files.

Talks/Articles

Ruby

  • Kiba - "Data processing & ETL framework for Ruby"
  • nokogiri - an excellent XML parser that "just works"
  • Square ETL
  • Sequel - "The Database Toolkit for Ruby"
  • Embulk - "a parallel bulk data loader that helps data transfer between various storages, databases, NoSQL and cloud services."

Go

  • Crunch - "A fast to develop, fast to run, Go based toolkit for ETL and feature extraction on Hadoop."
  • Pachyderm - A system for running processing pipeline jobs in containers and version controlling all data using a commit-based distributed filesystem.

Javascript

  • Datapumps - "Use pumps to import, export, transform or transfer data."
  • NoFlo - "a JavaScript implementation of Flow-Based Programming"

Talks/Articles

Cloud Services

  • Alteryx - Cloud ETL tool with an interface similar to GUI ETL tools.
  • AWS Data Pipeline - "a web service that helps you reliably process and move data between different AWS compute and storage services, as well as on-premise data sources, at specified intervals."
  • AWS Glue - AWS Glue generates the code (using Python and Spark) to execute your data transformations and data loading processes.
  • Amazon Simple Workflow Service (SWF) - "helps developers build, run, and scale background jobs that have parallel or sequential steps. You can think of Amazon SWF as a fully-managed state tracker and task coordinator in the Cloud."
  • AWS Batch - Allows executing jobs as containerized applications running on Amazon ECS. Also includes features for dynamically bidding for Spot Instances, integration with existing workflow engines, scheduling, monitoring, dependency modeling, and dynamic scaling/provisioning based on amount of work.
  • Google Dataflow - "Google Cloud Dataflow provides a simple, powerful model for building both batch and streaming parallel data processing pipelines."

Big Data (Hadoop Stack)

  • Pig - "a platform for analyzing large data sets that consists of a high-level language for expressing data analysis programs, coupled with infrastructure for evaluating these programs."
  • Spark - "a fast and general-purpose cluster computing system. It provides high-level APIs in Scala, Java, and Python that make parallel jobs easy to write, and an optimized engine that supports general computation graphs. It also supports a rich set of higher-level tools including Shark (Hive on Spark), MLlib for machine learning, GraphX for graph processing, and Spark Streaming."

ETL Tools (GUI)

Warning: If you're already familiar with a scripting language, GUI ETL tools are not a good replacement for a well structured application written with a scripting language. These tools lack flexibility and are a good example of the "inner-platform effect". With a large project, you will most likely run into instances where "the tool doesn't do that" and end up implementing something hacky with a script run by the GUI ETL tool. Also, the GUI can conceal complexity and the files these tools generate are impossible to code review. However, the GUI and out-of-the-box functionality can make some tasks simpler, especially for people not comfortable with writing code.

  • Apache NiFi - "a rich, web-based interface for designing, controlling, and monitoring a dataflow."
  • Informatica PowerCenter - "a toolset for establishing and maintaining enterprise-wide data warehouses. It has a customer base of over 5,000 companies."
  • Microsoft SSIS - "a component of the Microsoft SQL Server database software that can be used to perform a broad range of data migration tasks."
  • Pentaho Kettle - The most popular open-source graphical ETL tool.
  • Talend - "an open source application for data integration job design with a graphical development environment"

 

原文:https://github.com/huiwenhan/awesome-etl

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A curated list of notable ETL (extract, transform, load) frameworks, libraries and software.

【工作流工具】精选计算数据分析工作流系统

Chinese, Simplified

Computational Data Analysis Workflow Systems

Permalink: https://s.apache.org/existing-workflow-systems

An incomplete list

Please add new entries at the bottom.

See also: https://github.com/pditommaso/awesome-pipeline

  1. Arvados http://arvados.org
  2. Taverna http://www.taverna.org.uk/
  3. Galaxy http://galaxyproject.org/
  4. SHIWA https://www.shiwa-workflow.eu/
  5. Oozie https://oozie.apache.org/
  6. DNANexus https://wiki.dnanexus.com/API-Specification-v1.0.0/IO-and-Run-Specifications# https://wiki.dnanexus.com/API-Specification-v1.0.0/Workflows-and-Analyses#
  7. BioDT http://www.biodatomics.com/
  8. Agave http://agaveapi.co/live-docs/
  9. DiscoveryEnvironment http://www.iplantcollaborative.org/ci/discovery-environment
  10. Wings http://www.wings-workflows.org/
  11. Knime https://www.knime.org/
  12. make, rake, drake, ant, scons & many others. Software development relies heavily on tools to manage workflows related to compiling and packaging applications. For the most part these are file based and usually run on a single node, usually supporting parallel steps (make -j) and in some cases able to dispatch build steps to other machines (https://code.google.com/p/distcc/https://github.com/Factual/drake
  13. Snakemake https://bitbucket.org/snakemake/snakemake
  14. BPipe http://bpipe.org
  15. Ruffus https://code.google.com/p/ruffus/
  16. NextFlow http://nextflow.io
  17. Luigi http://github.com/spotify/luigi https://luigi.readthedocs.io
  18. SciLuigi. Helper library built on top of Luigi to ease development of Scientific workflows in Luigi: http://github.com/pharmbio/sciluigi
  19. Luigi Analysis Workflow (LAW) https://github.com/riga/law
  20. GATK Queue https://www.broadinstitute.org/gatk/guide/topic?name=queue
  21. Yabi https://ccg.murdoch.edu.au/yabi
  22. seqware Workflows are written in Java and executed using the Oozie Workflow Engine on Hadoop or SGE clusters. Uses Zip64 files to group the workflow definition file, workflow itself, sample settings, and data dependencies in a single file that can be exchanged between SeqWare users or archived. https://seqware.github.io/ https://seqware.github.io/docs/6-pipeline/
  23. Ketrew https://github.com/hammerlab/ketrew
  24. Pegasus http://pegasus.isi.edu/
  25. Apache Airflow https://github.com/apache/airflow
  26. Cosmos https://cosmos.hms.harvard.edu/documentation/index.html http://bioinformatics.oxfordjournals.org/content/early/2014/07/24/bioinformatics.btu385.full [paper] Cosmos2: https://github.com/LPM-HMS/COSMOS2 http://cosmos.hms.harvard.edu/COSMOS2/
  27. Pinball https://github.com/pinterest/pinball
  28. bcbio https://bcbio-nextgen.readthedocs.org/en/latest/
  29. Chronos https://github.com/mesos/chronos
  30. Azkaban https://azkaban.github.io/
  31. Apache NiFi https://nifi.apache.org/docs/nifi-docs/html/overview.html
  32. flowr (R-based) http://docs.flowr.space/ https://github.com/sahilseth/flowr
  33. Mistral https://github.com/arteria-project https://wiki.openstack.org/wiki/Mistral#What_is_Mistral.3F https://docs.openstack.org/mistral/latest/user/wf_lang_v2.html
  34. nipype http://nipy.org/nipype/
  35. End of Day https://github.com/joestubbs/endofday
  36. BioDSL https://github.com/maasha/BioDSL
  37. BigDataScript http://pcingola.github.io/BigDataScript/
  38. Omics Pipe: uses Ruffus http://sulab.scripps.edu/omicspipe/
  39. Ensembl Hive https://github.com/Ensembl/ensembl-hive
  40. QuickNGS http://bifacility.uni-koeln.de/quickngs/web
  41. GenePattern http://www.broadinstitute.org/cancer/software/genepattern/
  42. Chipster http://chipster.csc.fi/
  43. The Genome Modeling System https://github.com/genome/gms
  44. Cuneiform, A Functional Workflow Language https://github.com/joergen7/cuneiform http://www.cuneiform-lang.org/
  45. Anvaya http://www.ncbi.nlm.nih.gov/pubmed/22809419 http://webapp.cabgrid.res.in/biocomp/Anvaya/ANVAYA_Main.html#HOWTO_INSTALL_ANVAYA
  46. Makeflow http://ccl.cse.nd.edu/software/makeflow/
  47. Airavata http://airavata.apache.org/
  48. Pyflow https://github.com/Illumina/pyflow
  49. Cluster Flow http://clusterflow.io
  50. Unipro UGENE http://ugene.net/ https://dx.doi.org/10.7717/peerj.644
  51. CloudSlang http://www.cloudslang.io/
  52. Stacks http://catchenlab.life.illinois.edu/stacks/
  53. Leaf http://www.francesconapolitano.it/leaf/index.html
  54. omictools http://omictools.com/
  55. Job Description Language. The Job Description Language, JDL, is a high-level, user-oriented language based on Condor classified advertisements for describing jobs and aggregates of jobs such as Direct Acyclic Graphs and Collections. https://edms.cern.ch/ui/file/590869/1/WMS-JDL.pdf
  56. YAWL yet another workflow language http://dx.doi.org/10.1016/j.is.2004.02.002 http://www.yawlfoundation.org/
  57. Triquetrum https://projects.eclipse.org/projects/technology.triquetrum https://github.com/eclipse/triquetrum/
  58. Kronos https://github.com/jtaghiyar/kronos
  59. qsubsec http://doi.org/10.1093/bioinformatics/btv698 https://github.com/alastair-droop/qsubsec
  60. YesWorkflow http://yesworkflow.org
  61. gwf - Grid WorkFlow https://github.com/gwforg/gwf http://gwf.readthedocs.io/
  62. Fireworks. https://pythonhosted.org/FireWorks/
  63. NGLess: NGS with less work http://ngless.rtfd.io
  64. pypipegraph https://github.com/TyberiusPrime/pypipegraph
  65. Cromwell https://github.com/broadinstitute/cromwell
  66. Dagobah - Simple DAG-based job scheduler in Python. https://github.com/thieman/dagobah
  67. sushi https://github.com/uzh/sushi
  68. Clinical Trial Processor - A program for processing clinical trials data. http://mircwiki.rsna.org/index.php?title=MIRC_CTP
  69. Noodles http://nlesc.github.io/noodles/
  70. Swift & Swift/T http://swift-lang.org/main/ http://swift-lang.org/Swift-T/
  71. Consonance (runs SeqWare & CWL) https://github.com/Consonance/consonance/wiki
  72. Dog https://github.com/dogtools/dog
  73. Produce https://github.com/texttheater/produce
  74. LONI Pipeline http://pipeline.loni.usc.edu/
  75. Cpipe https://github.com/MelbourneGenomics/cpipe
  76. AWE https://github.com/MG-RAST/AWE
  77. (Py)COMPSs https://www.bsc.es/research-and-development/software-and-apps/software-list/comp-superscalar/
  78. KLIKO https://github.com/gijzelaerr/kliko
  79. SoS Workflow https://github.com/vatlab/SoS https://vatlab.github.io/sos-docs/ https://doi.org/10.1093/bioinformatics/bty405 https://doi.org/10.1371/journal.pcbi.1006843
  80. XNAT Pipeline Engine https://wiki.xnat.org/display/XNAT/Pipeline+Engine https://wiki.xnat.org/display/XNAT/XNAT+Pipeline+Development+Schema
  81. Metapipe https://github.com/TorkamaniLab/metapipe
  82. OCCAM (Open Curation for Computer Architecture Modeling) https://occam.cs.pitt.edu/
  83. Copernicus http://www.copernicus-computing.org
  84. iRODS Rule Language https://github.com/samuell/irods-cheatsheets/blob/master/irods-rule-lang-full-guide.md
  85. VisTrails https://www.vistrails.org
  86. Bionode Watermill https://github.com/bionode/bionode-watermill
  87. BIOVIA Pipeline Pilot Overview http://accelrys.com/products/collaborative-science/biovia-pipeline-pilot/
  88. Dagman A meta-scheduler for HTCondor https://research.cs.wisc.edu/htcondor/dagman/dagman.html
  89. UNICORE https://www.unicore.eu/docstore/workflow-7.6.0/workflow-manual.html#wf_dialect
  90. Toil (A scalable, efficient, cross-platform and easy-to-use workflow engine in pure Python) https://github.com/BD2KGenomics/toil
  91. Cylc (a workflow engine for cycling systems) https://cylc.github.io/
  92. Autodesk Cloud Compute Canon https://github.com/Autodesk/cloud-compute-cannon
  93. Civet https://github.com/TheJacksonLaboratory/civet
  94. Cumulus https://github.com/Kitware/cumulus
  95. High-performance integrated virtual environment (HIVE) https://hive.biochemistry.gwu.edu
  96. Cloudgene http://cloudgene.uibk.ac.at/cloudgene-yaml
  97. FASTR https://bitbucket.org/bigr_erasmusmc/fastr/ http://fastr.readthedocs.io/en/stable/
  98. BioMake https://github.com/evoldoers/biomake http://dx.doi.org/10.1101/093245
  99. remake https://github.com/richfitz/remake
  100. SciFloware http://www-sop.inria.fr/members/Didier.Parigot/pmwiki/Scifloware/
  101. OpenAlea http://openalea.gforge.inria.fr/dokuwiki/doku.php https://hal.archives-ouvertes.fr/hal-01166298/file/openalea-PradalCohen-Boulakia.pdf
  102. COMBUSTI/O https://github.com/jarlebass/combustio http://hdl.handle.net/10037/9361
  103. BioCloud https://github.com/ccwang002/biocloud-server-kai http://doi.org/10.6342/NTU201601295
  104. Triana http://www.trianacode.org/ (website seems to have been taken over by SEO)
  105. Kepler https://kepler-project.org/
  106. Anduril http://anduril.org/site/
  107. dgsh http://www.dmst.aueb.gr/dds/sw/dgsh/
  108. EDGE bioinformatics: Empowering the Development of Genomics Expertise https://bioedge.lanl.gov/edge_ui/ http://edge.readthedocs.io/ https://lanl-bioinformatics.github.io/EDGE/
  109. Pachyderm http://pachyderm.io/ http://pachyderm.readthedocs.io/en/stable/advanced/advanced.html
  110. Digdag https://www.digdag.io/
  111. Agua / Automated Genomics Utilities Agent http://aguadev.org
  112. BioDepot Workflow Builder (BwB) https://github.com/BioDepot/BioDepot-workflow-builder https://doi.org/10.1101/099010
  113. IMP: a pipeline for reproducible reference-independent integrated metagenomic and metatranscriptomic analyses http://r3lab.uni.lu/web/imp/ https://doi.org/10.1186/s13059-016-1116-8
  114. Butler https://github.com/llevar/butler
  115. adage / yadage https://github.com/diana-hep/adage https://github.com/diana-hep/yadage
  116. HI-WAY: Execution of Scientific Workflows on Hadoop YARN https://github.com/marcbux/Hi-WAY https://openproceedings.org/2017/conf/edbt/paper-248.pdf
  117. OpenMOLE https://github.com/openmole/openmole https://www.openmole.org/ https://doi.org/10.3389/fninf.2017.00021
  118. Biopet https://github.com/biopet/biopet
  119. Nephele https://nephele.niaid.nih.gov/
  120. TOPPAS http://doi.org/10.1021/pr300187f
  121. SBpipe https://pdp10.github.io/sbpipe/ https://github.com/pdp10/sbpipe https://doi.org/10.1186/s12918-017-0423-3
  122. Dray http://dray.it/
  123. GenomeVIP https://github.com/ding-lab/GenomeVIP https://doi.org/10.1101/gr.211656.116
  124. GridSAM https://sourceforge.net/projects/gridsam/
  125. Roddy https://github.com/eilslabs/Roddy
  126. SciFlo (historical; doesn't seem to be maintained anymore) https://web.archive.org/web/20161118011409/https://sciflo.jpl.nasa.gov/SciFloWiki/FrontPage
  127. GNU Guix Workflow Language https://git.roelj.com/guix/gwl.git#gnu-guix-workflow-language-extension https://github.com/UMCUGenetics/guix-workflows/blob/master/umcu/workflows/rnaseq.scm
  128. Porcupine https://timvanmourik.github.io/Porcupine/
  129. Parsl (a Parallel Scripting Library for Python) http://parsl-project.org
  130. ECFLOW (Workflow primarily for Meteorological Applications) https://software.ecmwf.int/wiki/display/ECFLOW/ecflow+home
  131. Ophidia http://ophidia.cmcc.it/
  132. WebLicht https://weblicht.sfs.uni-tuebingen.de/
  133. GATE Cloud https://cloud.gate.ac.uk/
  134. SCIPION http://scipion.cnb.csic.es/m/home/ https://github.com/I2PC/scipion/wiki/Creating-a-Protocol
  135. Ergatis http://ergatis.sourceforge.net/
  136. TIGR "Workflow" https://sourceforge.net/projects/tigr-workflow/ http://tigr-workflow.sourceforge.net/
  137. Archivematica https://wiki.archivematica.org/Main_Page (A preservation workflow system that implements the ISO-OAIS standard using gearman/MCP)
  138. Martian http://martian-lang.org/about/
  139. BioMAJ http://genouest.github.io/biomaj/
  140. Conveyor http://conveyor.cebitec.uni-bielefeld.de (retired). https://academic.oup.com/bioinformatics/article/27/7/903/230562/Conveyor-a-workflow-engine-for-bioinformatic
  141. Biopipe http://www.biopipe.org (appears to be defunct) https://www.ncbi.nlm.nih.gov/pmc/articles/PMC403782/
  142. Wildfire http://wildfire.bii.a-star.edu.sg/ https://bmcbioinformatics.biomedcentral.com/articles/10.1186/1471-2105-6-69
  143. BioWBI http://bioinformatics.hsanmartino.it/bits_library/library/00079.pdf
  144. BioWMS http://bioinformatics.hsanmartino.it/bits_library/library/00568.pdf
  145. BioMoby http://biomoby.open-bio.org/ https://bmcbioinformatics.biomedcentral.com/articles/10.1186/1471-2105-7-523
  146. SIBIOS http://ieeexplore.ieee.org/document/1309094/
  147. NGSANE https://github.com/BauerLab/ngsane https://academic.oup.com/bioinformatics/article/30/10/1471/266879/NGSANE-a-lightweight-production-informatics
  148. Pwrake https://github.com/misshie/Workflows https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3180464/
  149. Nesoni https://github.com/Victorian-Bioinformatics-Consortium/nesoni
  150. Skam http://skam.sourceforge.net/skam-intro.html
  151. TREVA http://bioinformatics.petermac.org/treva/ http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0095217
  152. EGene https://www.semanticscholar.org/paper/EGene-a-configurable-pipeline-generation-system-fo-Durham-Kashiwabara/4c0656195b5efcdd3aa7bdcb55fc95a957c150aa https://academic.oup.com/bioinformatics/article/30/18/2659/2475637/EuGene-PP-a-next-generation-automated-annotation
  153. WEP https://bioinformatics.cineca.it/wep/ https://bmcbioinformatics.biomedcentral.com/articles/10.1186/1471-2105-14-S7-S11
  154. Microbase http://www.microbasecloud.com/
  155. e-Science Central http://www.esciencecentral.co.uk/ https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3538293/
  156. Cyrille2 https://bmcbioinformatics.biomedcentral.com/articles/10.1186/1471-2105-9-96
  157. PaPy https://code.google.com/archive/p/papy/ https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3051902/
  158. JobCenter https://github.com/yeastrc/jobcenter https://scfbm.biomedcentral.com/articles/10.1186/1751-0473-7-8
  159. CoreFlow https://www.ncbi.nlm.nih.gov/pubmed/24503186
  160. dynamic-pipeline https://code.google.com/archive/p/dynamic-pipeline/
  161. XiP http://xip.hgc.jp/wiki/en/Main_Page https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3530915/
  162. Eoulsan http://www.outils.genomique.biologie.ens.fr/eoulsan/ https://www.ncbi.nlm.nih.gov/pubmed/22492314
  163. CloudDOE http://clouddoe.iis.sinica.edu.tw/
  164. BioPig https://github.com/JGI-Bioinformatics/biopig https://www.ncbi.nlm.nih.gov/pubmed/24021384
  165. SeqPig https://github.com/HadoopGenomics/SeqPig https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3866557/
  166. zymake http://www-personal.umich.edu/~ebreck/code/zymake/
  167. JMS https://github.com/RUBi-ZA/JMS http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0134273
  168. CLC Genomics Workbench https://www.qiagenbioinformatics.com/products/clc-genomics-workbench/
  169. NG6 http://ng6.toulouse.inra.fr/ https://www.ncbi.nlm.nih.gov/pubmed/22958229
  170. VIBE http://www.incogen.com/vibe/
  171. WDL (Workflow Description Language) https://github.com/broadinstitute/wdl
  172. SciFlow https://github.com/kaizhang/SciFlow (not to be confused with SciFloware and SciFlo).
  173. Bioshake https://github.com/PapenfussLab/bioshake
  174. SciPipe http://scipipe.org
  175. Kapacitor / TICKscripts https://docs.influxdata.com/kapacitor/v1.3//tick/
  176. AiiDA: Automated Interactive Infrastructure and Database for Computational Science http://www.aiida.net/
  177. Reflow: a language and runtime for distributed, integrated data processing in the cloud https://github.com/grailbio/reflow
  178. Resolwe: an open source dataflow package for Django framework https://github.com/genialis/resolwe
  179. Yahoo! Pipes (historical) https://en.wikipedia.org/wiki/Yahoo!_Pipes
  180. Walrus https://github.com/fjukstad/walrus
  181. Apache Beam https://beam.apache.org/
  182. CLOSHA https://closha.kobic.re.kr/ https://www.bioexpress.re.kr/go_tutorial http://docplayer.net/19700397-Closha-manual-ver1-1-kobic-korean-bioinformation-center-kogun82-kribb-re-kr-2016-05-08-bioinformatics-workflow-management-system-in-bio-express.html https://doi.org/10.1186/s12859-018-2019-3
  183. WopMars https://github.com/aitgon/wopmars http://wopmars.readthedocs.io/
  184. flowing-clj https://github.com/stain/flowing-clj
  185. Plumbing and Graph https://github.com/plumatic/plumbing
  186. LabView http://www.ni.com/en-us/shop/labview.html
  187. MyOpenLab http://myopenlab.org/
  188. Max/MSP https://cycling74.com/products/max/
  189. NoFlo https://noflojs.org/
  190. Flowstone http://www.dsprobotics.com/flowstone.html
  191. HyperLoom https://code.it4i.cz/ADAS/loom https://code.it4i.cz/ADAS/loom
  192. Dask http://dask.pydata.org/en/latest/ https://github.com/dask/dask
  193. Stimela https://github.com/SpheMakh/Stimela https://github.com/SpheMakh/Stimela/wiki https://www.acru.ukzn.ac.za/~cosmosafari2017/wp-content/uploads/2017/02/makhathini.pdf
  194. JTracker https://jtracker.io/ https://github.com/jtracker-io
  195. PipelineDog http://pipeline.dog/ https://github.com/zhouanbo/pipelinedog https://doi.org/10.1093/bioinformatics/btx759
  196. DALiuGE https://arxiv.org/abs/1702.07617 https://github.com/ICRAR/daliuge https://daliuge.readthedocs.io/
  197. Overseer https://github.com/framed-data/overseer
  198. Squonk https://squonk.it/
  199. GC3Pie https://github.com/uzh/gc3pie
  200. Fractalide https://github.com/fractalide/fractalide
  201. TOGGLe https://doi.org/10.1101/245480 http://toggle.southgreen.fr/
  202. Askalon http://www.askalon.org
  203. Eclipse ICE (The Integrated Computational Environment) https://www.eclipse.org/ice
  204. Sandia Analysis Workbench (SAW) http://www.sandia.gov/saw/
  205. dispel4py https://github.com/dispel4py/dispel4py
  206. Jobber https://pypi.python.org/pypi/Jobber/0.1.4
  207. NeatSeq-Flow http://neatseq-flow.readthedocs.io/
  208. S4M https://bitbucket.org/uqokorn/s4m_base/wiki/Home
  209. Loom http://med.stanford.edu/gbsc/loom.html https://github.com/StanfordBioinformatics/loom http://loom.readthedocs.io/en/latest/templates.html
  210. Watchdog https://doi.org/10.1186/s12859-018-2107-4 https://github.com/klugem/watchdog
  211. phpflo https://github.com/phpflo/phpflo
  212. BASTet: Berkeley Analysis and Storage Toolkit https://openmsi.nersc.gov/openmsi/client/bastet.html https://biorack.github.io/BASTet/ https://doi.org/10.1109/TVCG.2017.2744479
  213. Tavaxy: Pattern based workflow system for the bioinformatics domain http://www.tavaxy.org/
  214. Ginflow: Decentralised adaptive workflow engine https://ginflow.inria.fr/
  215. SciApps: A cloud-based platform for reproducible bioinformatics workflows https://doi.org/10.1093/bioinformatics/bty439 https://www.sciapps.org/
  216. Stoa: Script Tracking for Observational Astronomy https://github.com/petehague/Stoa
  217. Collective Knowledge (CK) framework http://cknowledge.org/
  218. QosCosGrid (QCG) http://www.qoscosgrid.org/ http://www.qoscosgrid.org/trac/qcg-broker/wiki/qcg-advanced-client%20
  219. High-Throughput Binding Affinity Calculator (HTBAC) https://htbac.readthedocs.io/en/latest/ https://github.com/radical-cybertools/htbac https://arxiv.org/abs/1801.01174
  220. BioWorkbench (Swift-based) https://arxiv.org/abs/1801.03915 https://github.com/mmondelli/bioworkbench
  221. ENVI Task Engine https://gbdxdocs.digitalglobe.com/docs/envi-task-engine https://www.harrisgeospatial.com/Learn/Whitepapers/TabId/2359/ArtMID/10212/ArticleID/17299/Workflow-Tools-in-ENVI.aspx https://envi-py-engine.readthedocs.io/en/latest/index.html
  222. Pypeline https://github.com/cgarciae/pypeln
  223. mpipe http://vmlaker.github.io/mpipe/
  224. idseq-dag https://github.com/chanzuckerberg/idseq-dag
  225. Piper (based upon GATK Queue) https://github.com/NationalGenomicsInfrastructure/piper
  226. Apache Object Oriented Data Technology (OODT) http://oodt.apache.org/
  227. JX Workflow (DSL for Makeflow) https://ccl.cse.nd.edu/software/manuals/jx-quick.html http://ccl.cse.nd.edu/research/papers/jx-escience-2018.pdf
  228. The Adaptable IO System (ADIOS), ADIOS using applications can be the orchestrated into a workflow http://csmd.ornl.gov/adios
  229. GenPipes https://doi.org/10.1101/459552 https://bitbucket.org/mugqic/genpipes/src/master/
  230. Argo https://argoproj.github.io/ https://github.com/argoproj/argo https://github.com/argoproj/argo/blob/master/examples/README.md
  231. Reana https://reana.readthedocs.io/en/latest/ https://github.com/reanahub/reana
  232. Cuisine Framework https://www.astron.nl/~renting/cuisine.html
  233. Niassa https://github.com/oicr-gsi/niassa https://oicr-gsi.github.io/niassa-docs/
  234. pypeFLOW https://github.com/PacificBiosciences/pypeFLOW
  235. Tiny Cloud Engine http://ka.cb.k.u-tokyo.ac.jp/tce/
  236. Xbowflow https://github.com/ChrisSuess/Project-Xbow/tree/master/xbowflow
  237. AdaptiveMd https://github.com/markovmodel/adaptivemd
  238. Meshroom https://github.com/alicevision/meshroom
  239. LSST Data Management https://github.com/lsst/pipe_base
  240. CGAT-core https://github.com/cgat-developers/cgat-core
  241. Prefect https://docs.prefect.io/
  242. Apache SCXML engine https://commons.apache.org/proper/commons-scxml/guide/core-engine.html https://commons.apache.org/proper/commons-scxml/guide/scxml-documents.html
  243. IceProd https://github.com/WIPACrepo/iceprod
  244. AnADAMA2 http://huttenhower.sph.harvard.edu/anadama2
  245. Luna https://luna-lang.org/
  246. Passerelle https://code.google.com/archive/a/eclipselabs.org/p/passerelle
  247. Kurator-Akka https://github.com/kurator-org/kurator-akka
  248. Jug http://doi.org/10.5334/jors.161
  249. Node-RED https://nodered.org/
  250. Databolt Flow https://github.com/d6t/d6tflow
  251. Frictionless Data Package Pipelines https://github.com/frictionlessdata/datapackage-pipelines
  252. DataFlows https://github.com/datahq/dataflows
  253. Volcano https://github.com/volcano-sh/volcano
  254. DataJoint https://datajoint.io/
  255. DIRAC3 (LHCb grid software) https://iopscience.iop.org/article/10.1088/1742-6596/219/6/062029

 

原文:https://github.com/common-workflow-language/common-workflow-language/wiki/Existing-Workflow-systems

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SEO Title
Computational Data Analysis Workflow Systems

【机器学习精选】精选的机器学习框架,库和软件的精选列表。

Chinese, Simplified

Awesome Machine Learning Awesome

A curated list of awesome machine learning frameworks, libraries and software (by language). Inspired by awesome-php.

If you want to contribute to this list (please do), send me a pull request or contact me @josephmisiti. Also, a listed repository should be deprecated if:

  • Repository's owner explicitly say that "this library is not maintained".
  • Not committed for long time (2~3 years).

Further resources:

  • For a list of free machine learning books available for download, go here.

  • For a list of (mostly) free machine learning courses available online, go here.

  • For a list of blogs and newsletters on data science and machine learning, go here.

  • For a list of free-to-attend meetups and local events, go here.

Table of Contents

Frameworks and Libraries

Tools

Credits

APL

General-Purpose Machine Learning

  • naive-apl - Naive Bayesian Classifier implementation in APL. [Deprecated]

C

General-Purpose Machine Learning

  • Darknet - Darknet is an open source neural network framework written in C and CUDA. It is fast, easy to install, and supports CPU and GPU computation.
  • Recommender - A C library for product recommendations/suggestions using collaborative filtering (CF).
  • Hybrid Recommender System - A hybrid recommender system based upon scikit-learn algorithms. [Deprecated]
  • neonrvm - neonrvm is an open source machine learning library based on RVM technique. It's written in C programming language and comes with Python programming language bindings.

Computer Vision

  • CCV - C-based/Cached/Core Computer Vision Library, A Modern Computer Vision Library.
  • VLFeat - VLFeat is an open and portable library of computer vision algorithms, which has Matlab toolbox.

C++

Computer Vision

  • DLib - DLib has C++ and Python interfaces for face detection and training general object detectors.
  • EBLearn - Eblearn is an object-oriented C++ library that implements various machine learning models [Deprecated]
  • OpenCV - OpenCV has C++, C, Python, Java and MATLAB interfaces and supports Windows, Linux, Android and Mac OS.
  • VIGRA - VIGRA is a generic cross-platform C++ computer vision and machine learning library for volumes of arbitrary dimensionality with Python bindings.

General-Purpose Machine Learning

  • BanditLib - A simple Multi-armed Bandit library. [Deprecated]
  • Caffe - A deep learning framework developed with cleanliness, readability, and speed in mind. [DEEP LEARNING]
  • CatBoost - General purpose gradient boosting on decision trees library with categorical features support out of the box. It is easy to install, contains fast inference implementation and supports CPU and GPU (even multi-GPU) computation.
  • CNTK - The Computational Network Toolkit (CNTK) by Microsoft Research, is a unified deep-learning toolkit that describes neural networks as a series of computational steps via a directed graph.
  • CUDA - This is a fast C++/CUDA implementation of convolutional [DEEP LEARNING]
  • DeepDetect - A machine learning API and server written in C++11. It makes state of the art machine learning easy to work with and integrate into existing applications.
  • Distributed Machine learning Tool Kit (DMTK) - A distributed machine learning (parameter server) framework by Microsoft. Enables training models on large data sets across multiple machines. Current tools bundled with it include: LightLDA and Distributed (Multisense) Word Embedding.
  • DLib - A suite of ML tools designed to be easy to imbed in other applications.
  • DSSTNE - A software library created by Amazon for training and deploying deep neural networks using GPUs which emphasizes speed and scale over experimental flexibility.
  • DyNet - A dynamic neural network library working well with networks that have dynamic structures that change for every training instance. Written in C++ with bindings in Python.
  • Fido - A highly-modular C++ machine learning library for embedded electronics and robotics.
  • igraph - General purpose graph library.
  • Intel(R) DAAL - A high performance software library developed by Intel and optimized for Intel's architectures. Library provides algorithmic building blocks for all stages of data analytics and allows to process data in batch, online and distributed modes.
  • LightGBM - Microsoft's fast, distributed, high performance gradient boosting (GBDT, GBRT, GBM or MART) framework based on decision tree algorithms, used for ranking, classification and many other machine learning tasks.
  • libfm - A generic approach that allows to mimic most factorization models by feature engineering.
  • MLDB - The Machine Learning Database is a database designed for machine learning. Send it commands over a RESTful API to store data, explore it using SQL, then train machine learning models and expose them as APIs.
  • mlpack - A scalable C++ machine learning library.
  • MXNet - Lightweight, Portable, Flexible Distributed/Mobile Deep Learning with Dynamic, Mutation-aware Dataflow Dep Scheduler; for Python, R, Julia, Go, Javascript and more.
  • proNet-core - A general-purpose network embedding framework: pair-wise representations optimization Network Edit.
  • PyCUDA - Python interface to CUDA
  • ROOT - A modular scientific software framework. It provides all the functionalities needed to deal with big data processing, statistical analysis, visualization and storage.
  • shark - A fast, modular, feature-rich open-source C++ machine learning library.
  • Shogun - The Shogun Machine Learning Toolbox.
  • sofia-ml - Suite of fast incremental algorithms.
  • Stan - A probabilistic programming language implementing full Bayesian statistical inference with Hamiltonian Monte Carlo sampling.
  • Timbl - A software package/C++ library implementing several memory-based learning algorithms, among which IB1-IG, an implementation of k-nearest neighbor classification, and IGTree, a decision-tree approximation of IB1-IG. Commonly used for NLP.
  • Vowpal Wabbit (VW) - A fast out-of-core learning system.
  • Warp-CTC - A fast parallel implementation of Connectionist Temporal Classification (CTC), on both CPU and GPU.
  • XGBoost - A parallelized optimized general purpose gradient boosting library.
  • ThunderGBM - A fast library for GBDTs and Random Forests on GPUs.
  • ThunderSVM - A fast SVM library on GPUs and CPUs.
  • LKYDeepNN - A header-only C++11 Neural Network library. Low dependency, native traditional chinese document.
  • xLearn - A high performance, easy-to-use, and scalable machine learning package, which can be used to solve large-scale machine learning problems. xLearn is especially useful for solving machine learning problems on large-scale sparse data, which is very common in Internet services such as online advertisement and recommender systems.
  • Featuretools - A library for automated feature engineering. It excels at transforming transactional and relational datasets into feature matrices for machine learning using reusable feature engineering "primitives".
  • skynet - A library for learning neural network, has C-interface, net set in JSON. Written in C++ with bindings in Python, C++ and C#.
  • Feast - A feature store for the management, discovery, and access of machine learning features. Feast provides a consistent view of feature data for both model training and model serving.
  • Polyaxon - A platform for reproducible and scalable machine learning and deep learning.

Natural Language Processing

  • BLLIP Parser - BLLIP Natural Language Parser (also known as the Charniak-Johnson parser).
  • colibri-core - C++ library, command line tools, and Python binding for extracting and working with basic linguistic constructions such as n-grams and skipgrams in a quick and memory-efficient way.
  • CRF++ - Open source implementation of Conditional Random Fields (CRFs) for segmenting/labeling sequential data & other Natural Language Processing tasks. [Deprecated]
  • CRFsuite - CRFsuite is an implementation of Conditional Random Fields (CRFs) for labeling sequential data. [Deprecated]
  • frog - Memory-based NLP suite developed for Dutch: PoS tagger, lemmatiser, dependency parser, NER, shallow parser, morphological analyzer.
  • libfolia - C++ library for the FoLiA format
  • MeTA - MeTA : ModErn Text Analysis is a C++ Data Sciences Toolkit that facilitates mining big text data.
  • MIT Information Extraction Toolkit - C, C++, and Python tools for named entity recognition and relation extraction
  • ucto - Unicode-aware regular-expression based tokenizer for various languages. Tool and C++ library. Supports FoLiA format.

Speech Recognition

  • Kaldi - Kaldi is a toolkit for speech recognition written in C++ and licensed under the Apache License v2.0. Kaldi is intended for use by speech recognition researchers.

Sequence Analysis

  • ToPS - This is an objected-oriented framework that facilitates the integration of probabilistic models for sequences over a user defined alphabet. [Deprecated]

Gesture Detection

  • grt - The Gesture Recognition Toolkit (GRT) is a cross-platform, open-source, C++ machine learning library designed for real-time gesture recognition.

Common Lisp

General-Purpose Machine Learning

  • mgl - Neural networks (boltzmann machines, feed-forward and recurrent nets), Gaussian Processes.
  • mgl-gpr - Evolutionary algorithms. [Deprecated]
  • cl-libsvm - Wrapper for the libsvm support vector machine library. [Deprecated]
  • cl-online-learning - Online learning algorithms (Perceptron, AROW, SCW, Logistic Regression).
  • cl-random-forest - Implementation of Random Forest in Common Lisp.

Clojure

Natural Language Processing

  • Clojure-openNLP - Natural Language Processing in Clojure (opennlp).
  • Infections-clj - Rails-like inflection library for Clojure and ClojureScript.

General-Purpose Machine Learning

  • Touchstone - Clojure A/B testing library. [Deprecated]
  • Clojush - The Push programming language and the PushGP genetic programming system implemented in Clojure.
  • Infer - Inference and machine learning in Clojure. [Deprecated]
  • Clj-ML - A machine learning library for Clojure built on top of Weka and friends. [Deprecated]
  • DL4CLJ - Clojure wrapper for Deeplearning4j.
  • Encog - Clojure wrapper for Encog (v3) (Machine-Learning framework that specializes in neural-nets). [Deprecated]
  • Fungp - A genetic programming library for Clojure. [Deprecated]
  • Statistiker - Basic Machine Learning algorithms in Clojure. [Deprecated]
  • clortex - General Machine Learning library using Numenta’s Cortical Learning Algorithm. [Deprecated]
  • comportex - Functionally composable Machine Learning library using Numenta’s Cortical Learning Algorithm. [Deprecated]
  • cortex - Neural networks, regression and feature learning in Clojure.
  • lambda-ml - Simple, concise implementations of machine learning techniques and utilities in Clojure.

Data Analysis / Data Visualization

  • Incanter - Incanter is a Clojure-based, R-like platform for statistical computing and graphics.
  • PigPen - Map-Reduce for Clojure.
  • Envision - Clojure Data Visualisation library, based on Statistiker and D3.

Crystal

General-Purpose Machine Learning

  • machine - Simple machine learning algorithm.
  • crystal-fann - FANN (Fast Artificial Neural Network) binding.

Elixir

General-Purpose Machine Learning

  • Simple Bayes - A Simple Bayes / Naive Bayes implementation in Elixir.
  • emel - A simple and functional machine learning library written in Elixir.

Natural Language Processing

  • Stemmer - An English (Porter2) stemming implementation in Elixir.

Erlang

General-Purpose Machine Learning

  • Disco - Map Reduce in Erlang. [Deprecated]
  • Yanni - ANN neural networks using Erlangs leightweight processes.

Go

Natural Language Processing

  • snowball - Snowball Stemmer for Go.
  • word-embedding - Word Embeddings: the full implementation of word2vec, GloVe in Go.
  • sentences - Golang implementation of Punkt sentence tokenizer.
  • go-ngram - In-memory n-gram index with compression. [Deprecated]
  • paicehusk - Golang implementation of the Paice/Husk Stemming Algorithm. [Deprecated]
  • go-porterstemmer - A native Go clean room implementation of the Porter Stemming algorithm. [Deprecated]

General-Purpose Machine Learning

  • birdland - A recommendation library in Go.
  • eaopt - An evolutionary optimization library.
  • leaves - A pure Go implementation of the prediction part of GBRTs, including XGBoost and LightGBM.
  • gobrain - Neural Networks written in Go.
  • go-mxnet-predictor - Go binding for MXNet c_predict_api to do inference with pre-trained model.
  • go-ml-transpiler - An open source Go transpiler for machine learning models.
  • golearn - Machine learning for Go.
  • goml - Machine learning library written in pure Go.
  • gorgonia - Deep learning in Go.
  • therfoo - An embedded deep learning library for Go.
  • neat - Plug-and-play, parallel Go framework for NeuroEvolution of Augmenting Topologies (NEAT). [Deprecated]
  • go-pr - Pattern recognition package in Go lang. [Deprecated]
  • go-ml - Linear / Logistic regression, Neural Networks, Collaborative Filtering and Gaussian Multivariate Distribution. [Deprecated]
  • GoNN - GoNN is an implementation of Neural Network in Go Language, which includes BPNN, RBF, PCN. [Deprecated]
  • bayesian - Naive Bayesian Classification for Golang. [Deprecated]
  • go-galib - Genetic Algorithms library written in Go / Golang. [Deprecated]
  • Cloudforest - Ensembles of decision trees in Go/Golang. [Deprecated]

Spatial analysis and geometry

  • go-geom - Go library to handle geometries.
  • gogeo - Spherical geometry in Go.

Data Analysis / Data Visualization

  • gota - Dataframes.
  • gonum/mat - A linear algebra package for Go.
  • gonum/optimize - Implementations of optimization algorithms.
  • gonum/plot - A plotting library.
  • gonum/stat - A statistics library.
  • SVGo - The Go Language library for SVG generation.
  • glot - Glot is a plotting library for Golang built on top of gnuplot.
  • globe - Globe wireframe visualization.
  • gonum/graph - General-purpose graph library.
  • go-graph - Graph library for Go/Golang language. [Deprecated]
  • RF - Random forests implementation in Go. [Deprecated]

Computer vision

  • GoCV - Package for computer vision using OpenCV 4 and beyond.

Haskell

General-Purpose Machine Learning

  • haskell-ml - Haskell implementations of various ML algorithms. [Deprecated]
  • HLearn - a suite of libraries for interpreting machine learning models according to their algebraic structure. [Deprecated]
  • hnn - Haskell Neural Network library.
  • hopfield-networks - Hopfield Networks for unsupervised learning in Haskell. [Deprecated]
  • DNNGraph - A DSL for deep neural networks. [Deprecated]
  • LambdaNet - Configurable Neural Networks in Haskell. [Deprecated]

Java

Natural Language Processing

  • Cortical.io - Retina: an API performing complex NLP operations (disambiguation, classification, streaming text filtering, etc...) as quickly and intuitively as the brain.
  • IRIS - Cortical.io's FREE NLP, Retina API Analysis Tool (written in JavaFX!) - See the Tutorial Video.
  • CoreNLP - Stanford CoreNLP provides a set of natural language analysis tools which can take raw English language text input and give the base forms of words.
  • Stanford Parser - A natural language parser is a program that works out the grammatical structure of sentences.
  • Stanford POS Tagger - A Part-Of-Speech Tagger (POS Tagger).
  • Stanford Name Entity Recognizer - Stanford NER is a Java implementation of a Named Entity Recognizer.
  • Stanford Word Segmenter - Tokenization of raw text is a standard pre-processing step for many NLP tasks.
  • Tregex, Tsurgeon and Semgrex - Tregex is a utility for matching patterns in trees, based on tree relationships and regular expression matches on nodes (the name is short for "tree regular expressions").
  • Stanford Phrasal: A Phrase-Based Translation System
  • Stanford English Tokenizer - Stanford Phrasal is a state-of-the-art statistical phrase-based machine translation system, written in Java.
  • Stanford Tokens Regex - A tokenizer divides text into a sequence of tokens, which roughly correspond to "words".
  • Stanford Temporal Tagger - SUTime is a library for recognizing and normalizing time expressions.
  • Stanford SPIED - Learning entities from unlabeled text starting with seed sets using patterns in an iterative fashion.
  • Stanford Topic Modeling Toolbox - Topic modeling tools to social scientists and others who wish to perform analysis on datasets.
  • Twitter Text Java - A Java implementation of Twitter's text processing library.
  • MALLET - A Java-based package for statistical natural language processing, document classification, clustering, topic modeling, information extraction, and other machine learning applications to text.
  • OpenNLP - a machine learning based toolkit for the processing of natural language text.
  • LingPipe - A tool kit for processing text using computational linguistics.
  • ClearTK - ClearTK provides a framework for developing statistical natural language processing (NLP) components in Java and is built on top of Apache UIMA. [Deprecated]
  • Apache cTAKES - Apache clinical Text Analysis and Knowledge Extraction System (cTAKES) is an open-source natural language processing system for information extraction from electronic medical record clinical free-text.
  • NLP4J - The NLP4J project provides software and resources for natural language processing. The project started at the Center for Computational Language and EducAtion Research, and is currently developed by the Center for Language and Information Research at Emory University. [Deprecated]
  • CogcompNLP - This project collects a number of core libraries for Natural Language Processing (NLP) developed in the University of Illinois' Cognitive Computation Group, for example illinois-core-utilities which provides a set of NLP-friendly data structures and a number of NLP-related utilities that support writing NLP applications, running experiments, etc, illinois-edison a library for feature extraction from illinois-core-utilities data structures and many other packages.

General-Purpose Machine Learning

  • aerosolve - A machine learning library by Airbnb designed from the ground up to be human friendly.
  • AMIDST Toolbox - A Java Toolbox for Scalable Probabilistic Machine Learning.
  • Datumbox - Machine Learning framework for rapid development of Machine Learning and Statistical applications.
  • ELKI - Java toolkit for data mining. (unsupervised: clustering, outlier detection etc.)
  • Encog - An advanced neural network and machine learning framework. Encog contains classes to create a wide variety of networks, as well as support classes to normalize and process data for these neural networks. Encog trains using multithreaded resilient propagation. Encog can also make use of a GPU to further speed processing time. A GUI based workbench is also provided to help model and train neural networks.
  • FlinkML in Apache Flink - Distributed machine learning library in Flink.
  • H2O - ML engine that supports distributed learning on Hadoop, Spark or your laptop via APIs in R, Python, Scala, REST/JSON.
  • htm.java - General Machine Learning library using Numenta’s Cortical Learning Algorithm.
  • liblinear-java - Java version of liblinear.
  • Mahout - Distributed machine learning.
  • Meka - An open source implementation of methods for multi-label classification and evaluation (extension to Weka).
  • MLlib in Apache Spark - Distributed machine learning library in Spark
  • Hydrosphere Mist - a service for deployment Apache Spark MLLib machine learning models as realtime, batch or reactive web services.
  • Neuroph - Neuroph is lightweight Java neural network framework
  • ORYX - Lambda Architecture Framework using Apache Spark and Apache Kafka with a specialization for real-time large-scale machine learning.
  • Samoa SAMOA is a framework that includes distributed machine learning for data streams with an interface to plug-in different stream processing platforms.
  • RankLib - RankLib is a library of learning to rank algorithms. [Deprecated]
  • rapaio - statistics, data mining and machine learning toolbox in Java.
  • RapidMiner - RapidMiner integration into Java code.
  • Stanford Classifier - A classifier is a machine learning tool that will take data items and place them into one of k classes.
  • SmileMiner - Statistical Machine Intelligence & Learning Engine.
  • SystemML - flexible, scalable machine learning (ML) language.
  • Weka - Weka is a collection of machine learning algorithms for data mining tasks.
  • LBJava - Learning Based Java is a modeling language for the rapid development of software systems, offers a convenient, declarative syntax for classifier and constraint definition directly in terms of the objects in the programmer's application.

Speech Recognition

  • CMU Sphinx - Open Source Toolkit For Speech Recognition purely based on Java speech recognition library.

Data Analysis / Data Visualization

  • Flink - Open source platform for distributed stream and batch data processing.
  • Hadoop - Hadoop/HDFS.
  • Onyx - Distributed, masterless, high performance, fault tolerant data processing. Written entirely in Clojure.
  • Spark - Spark is a fast and general engine for large-scale data processing.
  • Storm - Storm is a distributed realtime computation system.
  • Impala - Real-time Query for Hadoop.
  • DataMelt - Mathematics software for numeric computation, statistics, symbolic calculations, data analysis and data visualization.
  • Dr. Michael Thomas Flanagan's Java Scientific Library [Deprecated]

Deep Learning

Javascript

Natural Language Processing

  • Twitter-text - A JavaScript implementation of Twitter's text processing library.
  • natural - General natural language facilities for node.
  • Knwl.js - A Natural Language Processor in JS.
  • Retext - Extensible system for analyzing and manipulating natural language.
  • NLP Compromise - Natural Language processing in the browser.
  • nlp.js - An NLP library built in node over Natural, with entity extraction, sentiment analysis, automatic language identify, and so more

Data Analysis / Data Visualization

  • D3.js
  • High Charts
  • NVD3.js
  • dc.js
  • chartjs
  • dimple
  • amCharts
  • D3xter - Straight forward plotting built on D3. [Deprecated]
  • statkit - Statistics kit for JavaScript. [Deprecated]
  • datakit - A lightweight framework for data analysis in JavaScript
  • science.js - Scientific and statistical computing in JavaScript. [Deprecated]
  • Z3d - Easily make interactive 3d plots built on Three.js [Deprecated]
  • Sigma.js - JavaScript library dedicated to graph drawing.
  • C3.js - customizable library based on D3.js for easy chart drawing.
  • Datamaps - Customizable SVG map/geo visualizations using D3.js. [Deprecated]
  • ZingChart - library written on Vanilla JS for big data visualization.
  • cheminfo - Platform for data visualization and analysis, using the visualizer project.
  • Learn JS Data
  • AnyChart
  • FusionCharts
  • Nivo - built on top of the awesome d3 and Reactjs libraries

General-Purpose Machine Learning

  • Auto ML - Automated machine learning, data formatting, ensembling, and hyperparameter optimization for competitions and exploration- just give it a .csv file!
  • Convnet.js - ConvNetJS is a Javascript library for training Deep Learning models[DEEP LEARNING] [Deprecated]
  • Clusterfck - Agglomerative hierarchical clustering implemented in Javascript for Node.js and the browser. [Deprecated]
  • Clustering.js - Clustering algorithms implemented in Javascript for Node.js and the browser. [Deprecated]
  • Decision Trees - NodeJS Implementation of Decision Tree using ID3 Algorithm. [Deprecated]
  • DN2A - Digital Neural Networks Architecture. [Deprecated]
  • figue - K-means, fuzzy c-means and agglomerative clustering.
  • Gaussian Mixture Model - Unsupervised machine learning with multivariate Gaussian mixture model.
  • Node-fann - FANN (Fast Artificial Neural Network Library) bindings for Node.js [Deprecated]
  • Keras.js - Run Keras models in the browser, with GPU support provided by WebGL 2.
  • Kmeans.js - Simple Javascript implementation of the k-means algorithm, for node.js and the browser. [Deprecated]
  • LDA.js - LDA topic modeling for Node.js
  • Learning.js - Javascript implementation of logistic regression/c4.5 decision tree [Deprecated]
  • machinelearn.js - Machine Learning library for the web, Node.js and developers
  • mil-tokyo - List of several machine learning libraries.
  • Node-SVM - Support Vector Machine for Node.js
  • Brain - Neural networks in JavaScript [Deprecated]
  • Brain.js - Neural networks in JavaScript - continued community fork of Brain.
  • Bayesian-Bandit - Bayesian bandit implementation for Node and the browser. [Deprecated]
  • Synaptic - Architecture-free neural network library for Node.js and the browser.
  • kNear - JavaScript implementation of the k nearest neighbors algorithm for supervised learning.
  • NeuralN - C++ Neural Network library for Node.js. It has advantage on large dataset and multi-threaded training. [Deprecated]
  • kalman - Kalman filter for Javascript. [Deprecated]
  • shaman - Node.js library with support for both simple and multiple linear regression. [Deprecated]
  • ml.js - Machine learning and numerical analysis tools for Node.js and the Browser!
  • ml5 - Friendly machine learning for the web!
  • Pavlov.js - Reinforcement learning using Markov Decision Processes.
  • MXNet - Lightweight, Portable, Flexible Distributed/Mobile Deep Learning with Dynamic, Mutation-aware Dataflow Dep Scheduler; for Python, R, Julia, Go, Javascript and more.
  • TensorFlow.js - A WebGL accelerated, browser based JavaScript library for training and deploying ML models.
  • JSMLT - Machine learning toolkit with classification and clustering for Node.js; supports visualization (see visualml.io).
  • xgboost-node - Run XGBoost model and make predictions in Node.js.
  • Netron - Visualizer for machine learning models.
  • WebDNN - Fast Deep Neural Network Javascript Framework. WebDNN uses next generation JavaScript API, WebGPU for GPU execution, and WebAssembly for CPU execution.

Misc

  • stdlib - A standard library for JavaScript and Node.js, with an emphasis on numeric computing. The library provides a collection of robust, high performance libraries for mathematics, statistics, streams, utilities, and more.
  • sylvester - Vector and Matrix math for JavaScript. [Deprecated]
  • simple-statistics - A JavaScript implementation of descriptive, regression, and inference statistics. Implemented in literate JavaScript with no dependencies, designed to work in all modern browsers (including IE) as well as in Node.js.
  • regression-js - A javascript library containing a collection of least squares fitting methods for finding a trend in a set of data.
  • Lyric - Linear Regression library. [Deprecated]
  • GreatCircle - Library for calculating great circle distance.
  • MLPleaseHelp - MLPleaseHelp is a simple ML resource search engine. You can use this search engine right now at https://jgreenemi.github.io/MLPleaseHelp/, provided via Github Pages.

Demos and Scripts

  • The Bot - Example of how the neural network learns to predict the angle between two points created with Synaptic.
  • Half Beer - Beer glass classifier created with Synaptic.

Julia

General-Purpose Machine Learning

  • MachineLearning - Julia Machine Learning library. [Deprecated]
  • MLBase - A set of functions to support the development of machine learning algorithms.
  • PGM - A Julia framework for probabilistic graphical models.
  • DA - Julia package for Regularized Discriminant Analysis.
  • Regression - Algorithms for regression analysis (e.g. linear regression and logistic regression). [Deprecated]
  • Local Regression - Local regression, so smooooth!
  • Naive Bayes - Simple Naive Bayes implementation in Julia. [Deprecated]
  • Mixed Models - A Julia package for fitting (statistical) mixed-effects models.
  • Simple MCMC - basic mcmc sampler implemented in Julia. [Deprecated]
  • Distances - Julia module for Distance evaluation.
  • Decision Tree - Decision Tree Classifier and Regressor.
  • Neural - A neural network in Julia.
  • MCMC - MCMC tools for Julia. [Deprecated]
  • Mamba - Markov chain Monte Carlo (MCMC) for Bayesian analysis in Julia.
  • GLM - Generalized linear models in Julia.
  • Gaussian Processes - Julia package for Gaussian processes.
  • Online Learning [Deprecated]
  • GLMNet - Julia wrapper for fitting Lasso/ElasticNet GLM models using glmnet.
  • Clustering - Basic functions for clustering data: k-means, dp-means, etc.
  • SVM - SVM's for Julia. [Deprecated]
  • Kernel Density - Kernel density estimators for julia.
  • MultivariateStats - Methods for dimensionality reduction.
  • NMF - A Julia package for non-negative matrix factorization.
  • ANN - Julia artificial neural networks. [Deprecated]
  • Mocha - Deep Learning framework for Julia inspired by Caffe. [Deprecated]
  • XGBoost - eXtreme Gradient Boosting Package in Julia.
  • ManifoldLearning - A Julia package for manifold learning and nonlinear dimensionality reduction.
  • MXNet - Lightweight, Portable, Flexible Distributed/Mobile Deep Learning with Dynamic, Mutation-aware Dataflow Dep Scheduler; for Python, R, Julia, Go, Javascript and more.
  • Merlin - Flexible Deep Learning Framework in Julia.
  • ROCAnalysis - Receiver Operating Characteristics and functions for evaluation probabilistic binary classifiers.
  • GaussianMixtures - Large scale Gaussian Mixture Models.
  • ScikitLearn - Julia implementation of the scikit-learn API.
  • Knet - Koç University Deep Learning Framework.
  • Flux - Relax! Flux is the ML library that doesn't make you tensor

Natural Language Processing

  • Topic Models - TopicModels for Julia. [Deprecated]
  • Text Analysis - Julia package for text analysis.
  • Word Tokenizers - Tokenizers for Natural Language Processing in Julia
  • Corpus Loaders - A julia package providing a variety of loaders for various NLP corpora.
  • Embeddings - Functions and data dependencies for loading various word embeddings
  • Languages - Julia package for working with various human languages
  • WordNet - A Julia package for Princeton's WordNet

Data Analysis / Data Visualization

  • Graph Layout - Graph layout algorithms in pure Julia.
  • LightGraphs - Graph modeling and analysis.
  • Data Frames Meta - Metaprogramming tools for DataFrames.
  • Julia Data - library for working with tabular data in Julia. [Deprecated]
  • Data Read - Read files from Stata, SAS, and SPSS.
  • Hypothesis Tests - Hypothesis tests for Julia.
  • Gadfly - Crafty statistical graphics for Julia.
  • Stats - Statistical tests for Julia.
  • RDataSets - Julia package for loading many of the data sets available in R.
  • DataFrames - library for working with tabular data in Julia.
  • Distributions - A Julia package for probability distributions and associated functions.
  • Data Arrays - Data structures that allow missing values. [Deprecated]
  • Time Series - Time series toolkit for Julia.
  • Sampling - Basic sampling algorithms for Julia.

Misc Stuff / Presentations

  • DSP - Digital Signal Processing (filtering, periodograms, spectrograms, window functions).
  • JuliaCon Presentations - Presentations for JuliaCon.
  • SignalProcessing - Signal Processing tools for Julia.
  • Images - An image library for Julia.
  • DataDeps - Reproducible data setup for reproducible science.

Lua

General-Purpose Machine Learning

  • Torch7
    • cephes - Cephes mathematical functions library, wrapped for Torch. Provides and wraps the 180+ special mathematical functions from the Cephes mathematical library, developed by Stephen L. Moshier. It is used, among many other places, at the heart of SciPy. [Deprecated]
    • autograd - Autograd automatically differentiates native Torch code. Inspired by the original Python version.
    • graph - Graph package for Torch. [Deprecated]
    • randomkit - Numpy's randomkit, wrapped for Torch. [Deprecated]
    • signal - A signal processing toolbox for Torch-7. FFT, DCT, Hilbert, cepstrums, stft.
    • nn - Neural Network package for Torch.
    • torchnet - framework for torch which provides a set of abstractions aiming at encouraging code re-use as well as encouraging modular programming.
    • nngraph - This package provides graphical computation for nn library in Torch7.
    • nnx - A completely unstable and experimental package that extends Torch's builtin nn library.
    • rnn - A Recurrent Neural Network library that extends Torch's nn. RNNs, LSTMs, GRUs, BRNNs, BLSTMs, etc.
    • dpnn - Many useful features that aren't part of the main nn package.
    • dp - A deep learning library designed for streamlining research and development using the Torch7 distribution. It emphasizes flexibility through the elegant use of object-oriented design patterns. [Deprecated]
    • optim - An optimization library for Torch. SGD, Adagrad, Conjugate-Gradient, LBFGS, RProp and more.
    • unsup - A package for unsupervised learning in Torch. Provides modules that are compatible with nn (LinearPsd, ConvPsd, AutoEncoder, ...), and self-contained algorithms (k-means, PCA). [Deprecated]
    • manifold - A package to manipulate manifolds.
    • svm - Torch-SVM library. [Deprecated]
    • lbfgs - FFI Wrapper for liblbfgs. [Deprecated]
    • vowpalwabbit - An old vowpalwabbit interface to torch. [Deprecated]
    • OpenGM - OpenGM is a C++ library for graphical modeling, and inference. The Lua bindings provide a simple way of describing graphs, from Lua, and then optimizing them with OpenGM. [Deprecated]
    • spaghetti - Spaghetti (sparse linear) module for torch7 by @MichaelMathieu [Deprecated]
    • LuaSHKit - A lua wrapper around the Locality sensitive hashing library SHKit [Deprecated]
    • kernel smoothing - KNN, kernel-weighted average, local linear regression smoothers. [Deprecated]
    • cutorch - Torch CUDA Implementation.
    • cunn - Torch CUDA Neural Network Implementation.
    • imgraph - An image/graph library for Torch. This package provides routines to construct graphs on images, segment them, build trees out of them, and convert them back to images. [Deprecated]
    • videograph - A video/graph library for Torch. This package provides routines to construct graphs on videos, segment them, build trees out of them, and convert them back to videos. [Deprecated]
    • saliency - code and tools around integral images. A library for finding interest points based on fast integral histograms. [Deprecated]
    • stitch - allows us to use hugin to stitch images and apply same stitching to a video sequence. [Deprecated]
    • sfm - A bundle adjustment/structure from motion package. [Deprecated]
    • fex - A package for feature extraction in Torch. Provides SIFT and dSIFT modules. [Deprecated]
    • OverFeat - A state-of-the-art generic dense feature extractor. [Deprecated]
    • wav2letter - a simple and efficient end-to-end Automatic Speech Recognition (ASR) system from Facebook AI Research.
  • Numeric Lua
  • Lunatic Python
  • SciLua
  • Lua - Numerical Algorithms [Deprecated]
  • Lunum [Deprecated]

Demos and Scripts

  • Core torch7 demos repository.
    • linear-regression, logistic-regression
    • face detector (training and detection as separate demos)
    • mst-based-segmenter
    • train-a-digit-classifier
    • train-autoencoder
    • optical flow demo
    • train-on-housenumbers
    • train-on-cifar
    • tracking with deep nets
    • kinect demo
    • filter-bank visualization
    • saliency-networks
  • Training a Convnet for the Galaxy-Zoo Kaggle challenge(CUDA demo)
  • Music Tagging - Music Tagging scripts for torch7.
  • torch-datasets - Scripts to load several popular datasets including:
    • BSR 500
    • CIFAR-10
    • COIL
    • Street View House Numbers
    • MNIST
    • NORB
  • Atari2600 - Scripts to generate a dataset with static frames from the Arcade Learning Environment.

Matlab

Computer Vision

  • Contourlets - MATLAB source code that implements the contourlet transform and its utility functions.
  • Shearlets - MATLAB code for shearlet transform.
  • Curvelets - The Curvelet transform is a higher dimensional generalization of the Wavelet transform designed to represent images at different scales and different angles.
  • Bandlets - MATLAB code for bandlet transform.
  • mexopencv - Collection and a development kit of MATLAB mex functions for OpenCV library.

Natural Language Processing

  • NLP - An NLP library for Matlab.

General-Purpose Machine Learning

  • Training a deep autoencoder or a classifier on MNIST digits - Training a deep autoencoder or a classifier on MNIST digits[DEEP LEARNING].
  • Convolutional-Recursive Deep Learning for 3D Object Classification - Convolutional-Recursive Deep Learning for 3D Object Classification[DEEP LEARNING].
  • Spider - The spider is intended to be a complete object orientated environment for machine learning in Matlab.
  • LibSVM - A Library for Support Vector Machines.
  • ThunderSVM - An Open-Source SVM Library on GPUs and CPUs
  • LibLinear - A Library for Large Linear Classification.
  • Machine Learning Module - Class on machine w/ PDF, lectures, code
  • Caffe - A deep learning framework developed with cleanliness, readability, and speed in mind.
  • Pattern Recognition Toolbox - A complete object-oriented environment for machine learning in Matlab.
  • Pattern Recognition and Machine Learning - This package contains the matlab implementation of the algorithms described in the book Pattern Recognition and Machine Learning by C. Bishop.
  • Optunity - A library dedicated to automated hyperparameter optimization with a simple, lightweight API to facilitate drop-in replacement of grid search. Optunity is written in Python but interfaces seamlessly with MATLAB.
  • MXNet - Lightweight, Portable, Flexible Distributed/Mobile Deep Learning with Dynamic, Mutation-aware Dataflow Dep Scheduler; for Python, R, Julia, Go, Javascript and more.
  • Machine Learning in MatLab/Octave - examples of popular machine learning algorithms (neural networks, linear/logistic regressions, K-Means, etc.) with code examples and mathematics behind them being explained.

Data Analysis / Data Visualization

  • matlab_bgl - MatlabBGL is a Matlab package for working with graphs.
  • gaimc - Efficient pure-Matlab implementations of graph algorithms to complement MatlabBGL's mex functions.

.NET

Computer Vision

  • OpenCVDotNet - A wrapper for the OpenCV project to be used with .NET applications.
  • Emgu CV - Cross platform wrapper of OpenCV which can be compiled in Mono to be run on Windows, Linus, Mac OS X, iOS, and Android.
  • AForge.NET - Open source C# framework for developers and researchers in the fields of Computer Vision and Artificial Intelligence. Development has now shifted to GitHub.
  • Accord.NET - Together with AForge.NET, this library can provide image processing and computer vision algorithms to Windows, Windows RT and Windows Phone. Some components are also available for Java and Android.

Natural Language Processing

  • Stanford.NLP for .NET - A full port of Stanford NLP packages to .NET and also available precompiled as a NuGet package.

General-Purpose Machine Learning

  • Accord-Framework -The Accord.NET Framework is a complete framework for building machine learning, computer vision, computer audition, signal processing and statistical applications.
  • Accord.MachineLearning - Support Vector Machines, Decision Trees, Naive Bayesian models, K-means, Gaussian Mixture models and general algorithms such as Ransac, Cross-validation and Grid-Search for machine-learning applications. This package is part of the Accord.NET Framework.
  • DiffSharp - An automatic differentiation (AD) library providing exact and efficient derivatives (gradients, Hessians, Jacobians, directional derivatives, and matrix-free Hessian- and Jacobian-vector products) for machine learning and optimization applications. Operations can be nested to any level, meaning that you can compute exact higher-order derivatives and differentiate functions that are internally making use of differentiation, for applications such as hyperparameter optimization.
  • Encog - An advanced neural network and machine learning framework. Encog contains classes to create a wide variety of networks, as well as support classes to normalize and process data for these neural networks. Encog trains using multithreaded resilient propagation. Encog can also make use of a GPU to further speed processing time. A GUI based workbench is also provided to help model and train neural networks.
  • GeneticSharp - Multi-platform genetic algorithm library for .NET Core and .NET Framework. The library has several implementations of GA operators, like: selection, crossover, mutation, reinsertion and termination.
  • Infer.NET - Infer.NET is a framework for running Bayesian inference in graphical models. One can use Infer.NET to solve many different kinds of machine learning problems, from standard problems like classification, recommendation or clustering through to customised solutions to domain-specific problems. Infer.NET has been used in a wide variety of domains including information retrieval, bioinformatics, epidemiology, vision, and many others.
  • ML.NET - ML.NET is a cross-platform open-source machine learning framework which makes machine learning accessible to .NET developers. ML.NET was originally developed in Microsoft Research and evolved into a significant framework over the last decade and is used across many product groups in Microsoft like Windows, Bing, PowerPoint, Excel and more.
  • Neural Network Designer - DBMS management system and designer for neural networks. The designer application is developed using WPF, and is a user interface which allows you to design your neural network, query the network, create and configure chat bots that are capable of asking questions and learning from your feed back. The chat bots can even scrape the internet for information to return in their output as well as to use for learning.
  • Vulpes - Deep belief and deep learning implementation written in F# and leverages CUDA GPU execution with Alea.cuBase.

Data Analysis / Data Visualization

  • numl - numl is a machine learning library intended to ease the use of using standard modeling techniques for both prediction and clustering.
  • Math.NET Numerics - Numerical foundation of the Math.NET project, aiming to provide methods and algorithms for numerical computations in science, engineering and every day use. Supports .Net 4.0, .Net 3.5 and Mono on Windows, Linux and Mac; Silverlight 5, WindowsPhone/SL 8, WindowsPhone 8.1 and Windows 8 with PCL Portable Profiles 47 and 344; Android/iOS with Xamarin.
  • Sho - Sho is an interactive environment for data analysis and scientific computing that lets you seamlessly connect scripts (in IronPython) with compiled code (in .NET) to enable fast and flexible prototyping. The environment includes powerful and efficient libraries for linear algebra as well as data visualization that can be used from any .NET language, as well as a feature-rich interactive shell for rapid development.

Objective C

General-Purpose Machine Learning

  • YCML - A Machine Learning framework for Objective-C and Swift (OS X / iOS).
  • MLPNeuralNet - Fast multilayer perceptron neural network library for iOS and Mac OS X. MLPNeuralNet predicts new examples by trained neural network. It is built on top of the Apple's Accelerate Framework, using vectorized operations and hardware acceleration if available. [Deprecated]
  • MAChineLearning - An Objective-C multilayer perceptron library, with full support for training through backpropagation. Implemented using vDSP and vecLib, it's 20 times faster than its Java equivalent. Includes sample code for use from Swift.
  • BPN-NeuralNetwork - It implemented 3 layers neural network ( Input Layer, Hidden Layer and Output Layer ) and it named Back Propagation Neural Network (BPN). This network can be used in products recommendation, user behavior analysis, data mining and data analysis. [Deprecated]
  • Multi-Perceptron-NeuralNetwork - it implemented multi-perceptrons neural network (ニューラルネットワーク) based on Back Propagation Neural Network (BPN) and designed unlimited-hidden-layers.
  • KRHebbian-Algorithm - It is a non-supervisor and self-learning algorithm (adjust the weights) in neural network of Machine Learning. [Deprecated]
  • KRKmeans-Algorithm - It implemented K-Means the clustering and classification algorithm. It could be used in data mining and image compression. [Deprecated]
  • KRFuzzyCMeans-Algorithm - It implemented Fuzzy C-Means (FCM) the fuzzy clustering / classification algorithm on Machine Learning. It could be used in data mining and image compression. [Deprecated]

OCaml

General-Purpose Machine Learning

  • Oml - A general statistics and machine learning library.
  • GPR - Efficient Gaussian Process Regression in OCaml.
  • Libra-Tk - Algorithms for learning and inference with discrete probabilistic models.
  • TensorFlow - OCaml bindings for TensorFlow.

Perl

Data Analysis / Data Visualization

General-Purpose Machine Learning

Perl 6

Data Analysis / Data Visualization

General-Purpose Machine Learning

PHP

Natural Language Processing

  • jieba-php - Chinese Words Segmentation Utilities.

General-Purpose Machine Learning

  • PHP-ML - Machine Learning library for PHP. Algorithms, Cross Validation, Neural Network, Preprocessing, Feature Extraction and much more in one library.
  • PredictionBuilder - A library for machine learning that builds predictions using a linear regression.
  • Rubix ML - A high-level machine learning (ML) library that lets you build programs that learn from data using the PHP language.
  • 19 Questions - A machine learning / bayesian inference assigning attributes to objects.

Python

Computer Vision

  • Scikit-Image - A collection of algorithms for image processing in Python.
  • SimpleCV - An open source computer vision framework that gives access to several high-powered computer vision libraries, such as OpenCV. Written on Python and runs on Mac, Windows, and Ubuntu Linux.
  • Vigranumpy - Python bindings for the VIGRA C++ computer vision library.
  • OpenFace - Free and open source face recognition with deep neural networks.
  • PCV - Open source Python module for computer vision. [Deprecated]
  • face_recognition - Face recognition library that recognize and manipulate faces from Python or from the command line.
  • dockerface - Easy to install and use deep learning Faster R-CNN face detection for images and video in a docker container.
  • Detectron - FAIR's software system that implements state-of-the-art object detection algorithms, including Mask R-CNN. It is written in Python and powered by the Caffe2 deep learning framework.
  • albumentations - А fast and framework agnostic image augmentation library that implements a diverse set of augmentation techniques. Supports classification, segmentation, detection out of the box. Was used to win a number of Deep Learning competitions at Kaggle, Topcoder and those that were a part of the CVPR workshops.
  • pytessarct - Python-tesseract is an optical character recognition (OCR) tool for python. That is, it will recognize and "read" the text embedded in images.Python-tesseract is a wrapper for Google's Tesseract-OCR Engine>.
  • imutils - A library containg Convenience functions to make basic image processing operations such as translation, rotation, resizing, skeletonization, and displaying Matplotlib images easier with OpenCV and Python.
  • PyTorchCV - A PyTorch-Based Framework for Deep Learning in Computer Vision.

Natural Language Processing

  • pkuseg-python - A better version of Jieba, developed by Peking University.
  • NLTK - A leading platform for building Python programs to work with human language data.
  • Pattern - A web mining module for the Python programming language. It has tools for natural language processing, machine learning, among others.
  • Quepy - A python framework to transform natural language questions to queries in a database query language.
  • TextBlob - Providing a consistent API for diving into common natural language processing (NLP) tasks. Stands on the giant shoulders of NLTK and Pattern, and plays nicely with both.
  • YAlign - A sentence aligner, a friendly tool for extracting parallel sentences from comparable corpora. [Deprecated]
  • jieba - Chinese Words Segmentation Utilities.
  • SnowNLP - A library for processing Chinese text.
  • spammy - A library for email Spam filtering built on top of nltk
  • loso - Another Chinese segmentation library. [Deprecated]
  • genius - A Chinese segment base on Conditional Random Field.
  • KoNLPy - A Python package for Korean natural language processing.
  • nut - Natural language Understanding Toolkit. [Deprecated]
  • Rosetta - Text processing tools and wrappers (e.g. Vowpal Wabbit)
  • BLLIP Parser - Python bindings for the BLLIP Natural Language Parser (also known as the Charniak-Johnson parser). [Deprecated]
  • PyNLPl - Python Natural Language Processing Library. General purpose NLP library for Python. Also contains some specific modules for parsing common NLP formats, most notably for FoLiA, but also ARPA language models, Moses phrasetables, GIZA++ alignments.
  • python-ucto - Python binding to ucto (a unicode-aware rule-based tokenizer for various languages).
  • python-frog - Python binding to Frog, an NLP suite for Dutch. (pos tagging, lemmatisation, dependency parsing, NER)
  • python-zpar - Python bindings for ZPar, a statistical part-of-speech-tagger, constiuency parser, and dependency parser for English.
  • colibri-core - Python binding to C++ library for extracting and working with with basic linguistic constructions such as n-grams and skipgrams in a quick and memory-efficient way.
  • spaCy - Industrial strength NLP with Python and Cython.
  • PyStanfordDependencies - Python interface for converting Penn Treebank trees to Stanford Dependencies.
  • Distance - Levenshtein and Hamming distance computation. [Deprecated]
  • Fuzzy Wuzzy - Fuzzy String Matching in Python.
  • jellyfish - a python library for doing approximate and phonetic matching of strings.
  • editdistance - fast implementation of edit distance.
  • textacy - higher-level NLP built on Spacy.
  • stanford-corenlp-python - Python wrapper for Stanford CoreNLP [Deprecated]
  • CLTK - The Classical Language Toolkit.
  • rasa_nlu - turn natural language into structured data.
  • yase - Transcode sentence (or other sequence) to list of word vector .
  • Polyglot - Multilingual text (NLP) processing toolkit.
  • DrQA - Reading Wikipedia to answer open-domain questions.
  • Dedupe - A python library for accurate and scalable fuzzy matching, record deduplication and entity-resolution.
  • Snips NLU - Natural Language Understanding library for intent classification and entity extraction
  • NeuroNER - Named-entity recognition using neural networks providing state-of-the-art-results
  • DeepPavlov - conversational AI library with many pretrained Russian NLP models.
  • BigARTM - topic modelling platform.

General-Purpose Machine Learning

  • PyOD -> Python Outlier Detection, comprehensive and scalable Python toolkit for detecting outlying objects in multivariate data. Featured for Advanced models, including Neural Networks/Deep Learning and Outlier Ensembles.
  • steppy -> Lightweight, Python library for fast and reproducible machine learning experimentation. Introduces very simple interface that enables clean machine learning pipeline design.
  • steppy-toolkit -> Curated collection of the neural networks, transformers and models that make your machine learning work faster and more effective.
  • CNTK - Microsoft Cognitive Toolkit (CNTK), an open source deep-learning toolkit. Documentation can be found here.
  • auto_ml - Automated machine learning for production and analytics. Lets you focus on the fun parts of ML, while outputting production-ready code, and detailed analytics of your dataset and results. Includes support for NLP, XGBoost, CatBoost, LightGBM, and soon, deep learning.
  • machine learning - automated build consisting of a web-interface, and set of programmatic-interface API, for support vector machines. Corresponding dataset(s) are stored into a SQL database, then generated model(s) used for prediction(s), are stored into a NoSQL datastore.
  • XGBoost - Python bindings for eXtreme Gradient Boosting (Tree) Library.
  • Apache SINGA - An Apache Incubating project for developing an open source machine learning library.
  • Bayesian Methods for Hackers - Book/iPython notebooks on Probabilistic Programming in Python.
  • Featureforge A set of tools for creating and testing machine learning features, with a scikit-learn compatible API.
  • MLlib in Apache Spark - Distributed machine learning library in Spark
  • Hydrosphere Mist - a service for deployment Apache Spark MLLib machine learning models as realtime, batch or reactive web services.
  • scikit-learn - A Python module for machine learning built on top of SciPy.
  • metric-learn - A Python module for metric learning.
  • SimpleAI Python implementation of many of the artificial intelligence algorithms described on the book "Artificial Intelligence, a Modern Approach". It focuses on providing an easy to use, well documented and tested library.
  • astroML - Machine Learning and Data Mining for Astronomy.
  • graphlab-create - A library with various machine learning models (regression, clustering, recommender systems, graph analytics, etc.) implemented on top of a disk-backed DataFrame.
  • BigML - A library that contacts external servers.
  • pattern - Web mining module for Python.
  • NuPIC - Numenta Platform for Intelligent Computing.
  • Pylearn2 - A Machine Learning library based on Theano.
  • keras - High-level neural networks frontend for TensorFlowCNTK and Theano.
  • Lasagne - Lightweight library to build and train neural networks in Theano.
  • hebel - GPU-Accelerated Deep Learning Library in Python. [Deprecated]
  • Chainer - Flexible neural network framework.
  • prophet - Fast and automated time series forecasting framework by Facebook.
  • gensim - Topic Modelling for Humans.
  • topik - Topic modelling toolkit. [Deprecated]
  • PyBrain - Another Python Machine Learning Library.
  • Brainstorm - Fast, flexible and fun neural networks. This is the successor of PyBrain.
  • Surprise - A scikit for building and analyzing recommender systems.
  • Crab - A flexible, fast recommender engine. [Deprecated]
  • python-recsys - A Python library for implementing a Recommender System.
  • thinking bayes - Book on Bayesian Analysis.
  • Image-to-Image Translation with Conditional Adversarial Networks - Implementation of image to image (pix2pix) translation from the paper by isola et al.[DEEP LEARNING]
  • Restricted Boltzmann Machines -Restricted Boltzmann Machines in Python. [DEEP LEARNING]
  • Bolt - Bolt Online Learning Toolbox. [Deprecated]
  • CoverTree - Python implementation of cover trees, near-drop-in replacement for scipy.spatial.kdtree [Deprecated]
  • nilearn - Machine learning for NeuroImaging in Python.
  • neuropredict - Aimed at novice machine learners and non-expert programmers, this package offers easy (no coding needed) and comprehensive machine learning (evaluation and full report of predictive performance WITHOUT requiring you to code) in Python for NeuroImaging and any other type of features. This is aimed at absorbing the much of the ML workflow, unlike other packages like nilearn and pymvpa, which require you to learn their API and code to produce anything useful.
  • imbalanced-learn - Python module to perform under sampling and over sampling with various techniques.
  • Shogun - The Shogun Machine Learning Toolbox.
  • Pyevolve - Genetic algorithm framework. [Deprecated]
  • Caffe - A deep learning framework developed with cleanliness, readability, and speed in mind.
  • breze - Theano based library for deep and recurrent neural networks. [Deprecated]
  • pyhsmm - library for approximate unsupervised inference in Bayesian Hidden Markov Models (HMMs) and explicit-duration Hidden semi-Markov Models (HSMMs), focusing on the Bayesian Nonparametric extensions, the HDP-HMM and HDP-HSMM, mostly with weak-limit approximations.
  • mrjob - A library to let Python program run on Hadoop.
  • SKLL - A wrapper around scikit-learn that makes it simpler to conduct experiments.
  • neurolab
  • Spearmint - Spearmint is a package to perform Bayesian optimization according to the algorithms outlined in the paper: Practical Bayesian Optimization of Machine Learning Algorithms. Jasper Snoek, Hugo Larochelle and Ryan P. Adams. Advances in Neural Information Processing Systems, 2012. [Deprecated]
  • Pebl - Python Environment for Bayesian Learning. [Deprecated]
  • Theano - Optimizing GPU-meta-programming code generating array oriented optimizing math compiler in Python.
  • TensorFlow - Open source software library for numerical computation using data flow graphs.
  • pomegranate - Hidden Markov Models for Python, implemented in Cython for speed and efficiency.
  • python-timbl - A Python extension module wrapping the full TiMBL C++ programming interface. Timbl is an elaborate k-Nearest Neighbours machine learning toolkit.
  • deap - Evolutionary algorithm framework.
  • pydeep - Deep Learning In Python. [Deprecated]
  • mlxtend - A library consisting of useful tools for data science and machine learning tasks.
  • neon - Nervana's high-performance Python-based Deep Learning framework [DEEP LEARNING].
  • Optunity - A library dedicated to automated hyperparameter optimization with a simple, lightweight API to facilitate drop-in replacement of grid search.
  • Neural Networks and Deep Learning - Code samples for my book "Neural Networks and Deep Learning" [DEEP LEARNING].
  • Annoy - Approximate nearest neighbours implementation.
  • TPOT - Tool that automatically creates and optimizes machine learning pipelines using genetic programming. Consider it your personal data science assistant, automating a tedious part of machine learning.
  • pgmpy A python library for working with Probabilistic Graphical Models.
  • DIGITS - The Deep Learning GPU Training System (DIGITS) is a web application for training deep learning models.
  • Orange - Open source data visualization and data analysis for novices and experts.
  • MXNet - Lightweight, Portable, Flexible Distributed/Mobile Deep Learning with Dynamic, Mutation-aware Dataflow Dep Scheduler; for Python, R, Julia, Go, Javascript and more.
  • milk - Machine learning toolkit focused on supervised classification. [Deprecated]
  • TFLearn - Deep learning library featuring a higher-level API for TensorFlow.
  • REP - an IPython-based environment for conducting data-driven research in a consistent and reproducible way. REP is not trying to substitute scikit-learn, but extends it and provides better user experience. [Deprecated]
  • rgf_python - Python bindings for Regularized Greedy Forest (Tree) Library.
  • skbayes - Python package for Bayesian Machine Learning with scikit-learn API.
  • fuku-ml - Simple machine learning library, including Perceptron, Regression, Support Vector Machine, Decision Tree and more, it's easy to use and easy to learn for beginners.
  • Xcessiv - A web-based application for quick, scalable, and automated hyperparameter tuning and stacked ensembling.
  • PyTorch - Tensors and Dynamic neural networks in Python with strong GPU acceleration
  • ML-From-Scratch - Implementations of Machine Learning models from scratch in Python with a focus on transparency. Aims to showcase the nuts and bolts of ML in an accessible way.
  • Edward - A library for probabilistic modeling, inference, and criticism. Built on top of TensorFlow.
  • xRBM - A library for Restricted Boltzmann Machine (RBM) and its conditional variants in Tensorflow.
  • CatBoost - General purpose gradient boosting on decision trees library with categorical features support out of the box. It is easy to install, well documented and supports CPU and GPU (even multi-GPU) computation.
  • stacked_generalization - Implementation of machine learning stacking technic as handy library in Python.
  • modAL - A modular active learning framework for Python, built on top of scikit-learn.
  • Cogitare: A Modern, Fast, and Modular Deep Learning and Machine Learning framework for Python.
  • Parris - Parris, the automated infrastructure setup tool for machine learning algorithms.
  • neonrvm - neonrvm is an open source machine learning library based on RVM technique. It's written in C programming language and comes with Python programming language bindings.
  • Turi Create - Machine learning from Apple. Turi Create simplifies the development of custom machine learning models. You don't have to be a machine learning expert to add recommendations, object detection, image classification, image similarity or activity classification to your app.
  • xLearn - A high performance, easy-to-use, and scalable machine learning package, which can be used to solve large-scale machine learning problems. xLearn is especially useful for solving machine learning problems on large-scale sparse data, which is very common in Internet services such as online advertisement and recommender systems.
  • mlens - A high performance, memory efficient, maximally parallelized ensemble learning, integrated with scikit-learn.
  • Netron - Visualizer for machine learning models.
  • Thampi - Machine Learning Prediction System on AWS Lambda
  • MindsDB - Open Source framework to streamline use of neural networks.
  • Microsoft Recommenders: Examples and best practices for building recommendation systems, provided as Jupyter notebooks. The repo contains some of the latest state of the art algorithms from Microsoft Research as well as from other companies and institutions.
  • StellarGraph: Machine Learning on Graphs, a Python library for machine learning on graph-structured (network-structured) data.
  • BentoML: Toolkit for package and deploy machine learning models for serving in production
  • MiraiML: An asynchronous engine for continuous & autonomous machine learning, built for real-time usage.
  • numpy-ML: Reference implementations of ML models written in numpy
  • creme: A framework for online machine learning.
  • Neuraxle: A framework providing the right abstractions to ease research, development, and deployment of your ML pipelines.

Data Analysis / Data Visualization

  • SciPy - A Python-based ecosystem of open-source software for mathematics, science, and engineering.
  • NumPy - A fundamental package for scientific computing with Python.
  • Numba - Python JIT (just in time) compiler to LLVM aimed at scientific Python by the developers of Cython and NumPy.
  • Mars - A tensor-based framework for large-scale data computation which often regarded as a parallel and distributed version of NumPy.
  • NetworkX - A high-productivity software for complex networks.
  • igraph - binding to igraph library - General purpose graph library.
  • Pandas - A library providing high-performance, easy-to-use data structures and data analysis tools.
  • Open Mining - Business Intelligence (BI) in Python (Pandas web interface) [Deprecated]
  • PyMC - Markov Chain Monte Carlo sampling toolkit.
  • zipline - A Pythonic algorithmic trading library.
  • PyDy - Short for Python Dynamics, used to assist with workflow in the modeling of dynamic motion based around NumPy, SciPy, IPython, and matplotlib.
  • SymPy - A Python library for symbolic mathematics.
  • statsmodels - Statistical modeling and econometrics in Python.
  • astropy - A community Python library for Astronomy.
  • matplotlib - A Python 2D plotting library.
  • bokeh - Interactive Web Plotting for Python.
  • plotly - Collaborative web plotting for Python and matplotlib.
  • altair - A Python to Vega translator.
  • d3py - A plotting library for Python, based on D3.js.
  • PyDexter - Simple plotting for Python. Wrapper for D3xterjs; easily render charts in-browser.
  • ggplot - Same API as ggplot2 for R. [Deprecated]
  • ggfortify - Unified interface to ggplot2 popular R packages.
  • Kartograph.py - Rendering beautiful SVG maps in Python.
  • pygal - A Python SVG Charts Creator.
  • PyQtGraph - A pure-python graphics and GUI library built on PyQt4 / PySide and NumPy.
  • pycascading [Deprecated]
  • Petrel - Tools for writing, submitting, debugging, and monitoring Storm topologies in pure Python.
  • Blaze - NumPy and Pandas interface to Big Data.
  • emcee - The Python ensemble sampling toolkit for affine-invariant MCMC.
  • windML - A Python Framework for Wind Energy Analysis and Prediction.
  • vispy - GPU-based high-performance interactive OpenGL 2D/3D data visualization library.
  • cerebro2 A web-based visualization and debugging platform for NuPIC. [Deprecated]
  • NuPIC Studio An all-in-one NuPIC Hierarchical Temporal Memory visualization and debugging super-tool! [Deprecated]
  • SparklingPandas Pandas on PySpark (POPS).
  • Seaborn - A python visualization library based on matplotlib.
  • bqplot - An API for plotting in Jupyter (IPython).
  • pastalog - Simple, realtime visualization of neural network training performance.
  • Superset - A data exploration platform designed to be visual, intuitive, and interactive.
  • Dora - Tools for exploratory data analysis in Python.
  • Ruffus - Computation Pipeline library for python.
  • SOMPY - Self Organizing Map written in Python (Uses neural networks for data analysis).
  • somoclu Massively parallel self-organizing maps: accelerate training on multicore CPUs, GPUs, and clusters, has python API.
  • HDBScan - implementation of the hdbscan algorithm in Python - used for clustering
  • visualize_ML - A python package for data exploration and data analysis. [Deprecated]
  • scikit-plot - A visualization library for quick and easy generation of common plots in data analysis and machine learning.
  • Bowtie - A dashboard library for interactive visualizations using flask socketio and react.
  • lime - Lime is about explaining what machine learning classifiers (or models) are doing. It is able to explain any black box classifier, with two or more classes.
  • PyCM - PyCM is a multi-class confusion matrix library written in Python that supports both input data vectors and direct matrix, and a proper tool for post-classification model evaluation that supports most classes and overall statistics parameters
  • Dash - A framework for creating analytical web applications built on top of Plotly.js, React, and Flask
  • Lambdo - A workflow engine for solving machine learning problems by combining in one analysis pipeline (i) feature engineering and machine learning (ii) model training and prediction (iii) table population and column evaluation via user-defined (Python) functions.
  • TensorWatch - Debugging and visualization tool for machine learning and data science. It extensively leverages Jupyter Notebook to show real-time visualizations of data in running processes such as machine learning training.

Misc Scripts / iPython Notebooks / Codebases

Neural Networks

  • nn_builder - nn_builder is a python package that lets you build neural networks in 1 line
  • NeuralTalk - NeuralTalk is a Python+numpy project for learning Multimodal Recurrent Neural Networks that describe images with sentences.
  • Neuron - Neuron is simple class for time series predictions. It's utilize LNU (Linear Neural Unit), QNU (Quadratic Neural Unit), RBF (Radial Basis Function), MLP (Multi Layer Perceptron), MLP-ELM (Multi Layer Perceptron - Extreme Learning Machine) neural networks learned with Gradient descent or LeLevenberg–Marquardt algorithm. =======
  • NeuralTalk - NeuralTalk is a Python+numpy project for learning Multimodal Recurrent Neural Networks that describe images with sentences. [Deprecated]
  • Neuron - Neuron is simple class for time series predictions. It's utilize LNU (Linear Neural Unit), QNU (Quadratic Neural Unit), RBF (Radial Basis Function), MLP (Multi Layer Perceptron), MLP-ELM (Multi Layer Perceptron - Extreme Learning Machine) neural networks learned with Gradient descent or LeLevenberg–Marquardt algorithm. [Deprecated]
  • Data Driven Code - Very simple implementation of neural networks for dummies in python without using any libraries, with detailed comments.

Kaggle Competition Source Code

Reinforcement Learning

  • DeepMind Lab - DeepMind Lab is a 3D learning environment based on id Software's Quake III Arena via ioquake3 and other open source software. Its primary purpose is to act as a testbed for research in artificial intelligence, especially deep reinforcement learning.
  • Gym - OpenAI Gym is a toolkit for developing and comparing reinforcement learning algorithms.
  • Serpent.AI - Serpent.AI is a game agent framework that allows you to turn any video game you own into a sandbox to develop AI and machine learning experiments. For both researchers and hobbyists.
  • ViZDoom - ViZDoom allows developing AI bots that play Doom using only the visual information (the screen buffer). It is primarily intended for research in machine visual learning, and deep reinforcement learning, in particular.
  • Roboschool - Open-source software for robot simulation, integrated with OpenAI Gym.
  • Retro - Retro Games in Gym
  • SLM Lab - Modular Deep Reinforcement Learning framework in PyTorch.
  • Coach - Reinforcement Learning Coach by Intel® AI Lab enables easy experimentation with state of the art Reinforcement Learning algorithms

Ruby

Natural Language Processing

  • Awesome NLP with Ruby - Curated link list for practical natural language processing in Ruby.
  • Treat - Text REtrieval and Annotation Toolkit, definitely the most comprehensive toolkit I’ve encountered so far for Ruby.
  • Stemmer - Expose libstemmer_c to Ruby. [Deprecated]
  • Raspel - raspell is an interface binding for ruby. [Deprecated]
  • UEA Stemmer - Ruby port of UEALite Stemmer - a conservative stemmer for search and indexing.
  • Twitter-text-rb - A library that does auto linking and extraction of usernames, lists and hashtags in tweets.

General-Purpose Machine Learning

Data Analysis / Data Visualization

  • rsruby - Ruby - R bridge.
  • data-visualization-ruby - Source code and supporting content for my Ruby Manor presentation on Data Visualisation with Ruby. [Deprecated]
  • ruby-plot - gnuplot wrapper for Ruby, especially for plotting ROC curves into SVG files. [Deprecated]
  • plot-rb - A plotting library in Ruby built on top of Vega and D3. [Deprecated]
  • scruffy - A beautiful graphing toolkit for Ruby.
  • SciRuby
  • Glean - A data management tool for humans. [Deprecated]
  • Bioruby
  • Arel [Deprecated]

Misc

Rust

General-Purpose Machine Learning

  • deeplearn-rs - deeplearn-rs provides simple networks that use matrix multiplication, addition, and ReLU under the MIT license.
  • rustlearn - a machine learning framework featuring logistic regression, support vector machines, decision trees and random forests.
  • rusty-machine - a pure-rust machine learning library.
  • leaf - open source framework for machine intelligence, sharing concepts from TensorFlow and Caffe. Available under the MIT license. [Deprecated]
  • RustNN - RustNN is a feedforward neural network library. [Deprecated]
  • RusticSOM - A Rust library for Self Organising Maps (SOM).

R

General-Purpose Machine Learning

  • ahaz - ahaz: Regularization for semiparametric additive hazards regression. [Deprecated]
  • arules - arules: Mining Association Rules and Frequent Itemsets
  • biglasso - biglasso: Extending Lasso Model Fitting to Big Data in R.
  • bmrm - bmrm: Bundle Methods for Regularized Risk Minimization Package.
  • Boruta - Boruta: A wrapper algorithm for all-relevant feature selection.
  • bst - bst: Gradient Boosting.
  • C50 - C50: C5.0 Decision Trees and Rule-Based Models.
  • caret - Classification and Regression Training: Unified interface to ~150 ML algorithms in R.
  • caretEnsemble - caretEnsemble: Framework for fitting multiple caret models as well as creating ensembles of such models. [Deprecated]
  • CatBoost - General purpose gradient boosting on decision trees library with categorical features support out of the box for R.
  • Clever Algorithms For Machine Learning
  • CORElearn - CORElearn: Classification, regression, feature evaluation and ordinal evaluation.
  • CoxBoost - CoxBoost: Cox models by likelihood based boosting for a single survival endpoint or competing risks [Deprecated]
  • Cubist - Cubist: Rule- and Instance-Based Regression Modeling.
  • e1071 - e1071: Misc Functions of the Department of Statistics (e1071), TU Wien
  • earth - earth: Multivariate Adaptive Regression Spline Models
  • elasticnet - elasticnet: Elastic-Net for Sparse Estimation and Sparse PCA.
  • ElemStatLearn - ElemStatLearn: Data sets, functions and examples from the book: "The Elements of Statistical Learning, Data Mining, Inference, and Prediction" by Trevor Hastie, Robert Tibshirani and Jerome Friedman Prediction" by Trevor Hastie, Robert Tibshirani and Jerome Friedman.
  • evtree - evtree: Evolutionary Learning of Globally Optimal Trees.
  • forecast - forecast: Timeseries forecasting using ARIMA, ETS, STLM, TBATS, and neural network models.
  • forecastHybrid - forecastHybrid: Automatic ensemble and cross validation of ARIMA, ETS, STLM, TBATS, and neural network models from the "forecast" package.
  • fpc - fpc: Flexible procedures for clustering.
  • frbs - frbs: Fuzzy Rule-based Systems for Classification and Regression Tasks. [Deprecated]
  • GAMBoost - GAMBoost: Generalized linear and additive models by likelihood based boosting. [Deprecated]
  • gamboostLSS - gamboostLSS: Boosting Methods for GAMLSS.
  • gbm - gbm: Generalized Boosted Regression Models.
  • glmnet - glmnet: Lasso and elastic-net regularized generalized linear models.
  • glmpath - glmpath: L1 Regularization Path for Generalized Linear Models and Cox Proportional Hazards Model.
  • GMMBoost - GMMBoost: Likelihood-based Boosting for Generalized mixed models. [Deprecated]
  • grplasso - grplasso: Fitting user specified models with Group Lasso penalty.
  • grpreg - grpreg: Regularization paths for regression models with grouped covariates.
  • h2o - A framework for fast, parallel, and distributed machine learning algorithms at scale -- Deeplearning, Random forests, GBM, KMeans, PCA, GLM.
  • hda - hda: Heteroscedastic Discriminant Analysis. [Deprecated]
  • Introduction to Statistical Learning
  • ipred - ipred: Improved Predictors.
  • kernlab - kernlab: Kernel-based Machine Learning Lab.
  • klaR - klaR: Classification and visualization.
  • L0Learn - L0Learn: Fast algorithms for best subset selection.
  • lars - lars: Least Angle Regression, Lasso and Forward Stagewise. [Deprecated]
  • lasso2 - lasso2: L1 constrained estimation aka ‘lasso’.
  • LiblineaR - LiblineaR: Linear Predictive Models Based On The Liblinear C/C++ Library.
  • LogicReg - LogicReg: Logic Regression.
  • Machine Learning For Hackers
  • maptree - maptree: Mapping, pruning, and graphing tree models. [Deprecated]
  • mboost - mboost: Model-Based Boosting.
  • medley - medley: Blending regression models, using a greedy stepwise approach.
  • mlr - mlr: Machine Learning in R.
  • ncvreg - ncvreg: Regularization paths for SCAD- and MCP-penalized regression models.
  • nnet - nnet: Feed-forward Neural Networks and Multinomial Log-Linear Models. [Deprecated]
  • pamr - pamr: Pam: prediction analysis for microarrays. [Deprecated]
  • party - party: A Laboratory for Recursive Partytioning.
  • partykit - partykit: A Toolkit for Recursive Partytioning.
  • penalized - penalized: L1 (lasso and fused lasso) and L2 (ridge) penalized estimation in GLMs and in the Cox model.
  • penalizedLDA - penalizedLDA: Penalized classification using Fisher's linear discriminant. [Deprecated]
  • penalizedSVM - penalizedSVM: Feature Selection SVM using penalty functions.
  • quantregForest - quantregForest: Quantile Regression Forests.
  • randomForest - randomForest: Breiman and Cutler's random forests for classification and regression.
  • randomForestSRC - randomForestSRC: Random Forests for Survival, Regression and Classification (RF-SRC).
  • rattle - rattle: Graphical user interface for data mining in R.
  • rda - rda: Shrunken Centroids Regularized Discriminant Analysis.
  • rdetools - rdetools: Relevant Dimension Estimation (RDE) in Feature Spaces. [Deprecated]
  • REEMtree - REEMtree: Regression Trees with Random Effects for Longitudinal (Panel) Data. [Deprecated]
  • relaxo - relaxo: Relaxed Lasso. [Deprecated]
  • rgenoud - rgenoud: R version of GENetic Optimization Using Derivatives
  • Rmalschains - Rmalschains: Continuous Optimization using Memetic Algorithms with Local Search Chains (MA-LS-Chains) in R.
  • rminer - rminer: Simpler use of data mining methods (e.g. NN and SVM) in classification and regression. [Deprecated]
  • ROCR - ROCR: Visualizing the performance of scoring classifiers. [Deprecated]
  • RoughSets - RoughSets: Data Analysis Using Rough Set and Fuzzy Rough Set Theories. [Deprecated]
  • rpart - rpart: Recursive Partitioning and Regression Trees.
  • RPMM - RPMM: Recursively Partitioned Mixture Model.
  • RSNNS - RSNNS: Neural Networks in R using the Stuttgart Neural Network Simulator (SNNS).
  • RWeka - RWeka: R/Weka interface.
  • RXshrink - RXshrink: Maximum Likelihood Shrinkage via Generalized Ridge or Least Angle Regression.
  • sda - sda: Shrinkage Discriminant Analysis and CAT Score Variable Selection. [Deprecated]
  • spectralGraphTopology - spectralGraphTopology: Learning Graphs from Data via Spectral Constraints.
  • SuperLearner - Multi-algorithm ensemble learning packages.
  • svmpath - svmpath: svmpath: the SVM Path algorithm. [Deprecated]
  • tgp - tgp: Bayesian treed Gaussian process models. [Deprecated]
  • tree - tree: Classification and regression trees.
  • varSelRF - varSelRF: Variable selection using random forests.
  • XGBoost.R - R binding for eXtreme Gradient Boosting (Tree) Library.
  • Optunity - A library dedicated to automated hyperparameter optimization with a simple, lightweight API to facilitate drop-in replacement of grid search. Optunity is written in Python but interfaces seamlessly to R.
  • igraph - binding to igraph library - General purpose graph library.
  • MXNet - Lightweight, Portable, Flexible Distributed/Mobile Deep Learning with Dynamic, Mutation-aware Dataflow Dep Scheduler; for Python, R, Julia, Go, Javascript and more.
  • TDSP-Utilities - Two data science utilities in R from Microsoft: 1) Interactive Data Exploration, Analysis, and Reporting (IDEAR) ; 2) Automated Modeling and Reporting (AMR).

Data Analysis / Data Visualization

  • ggplot2 - A data visualization package based on the grammar of graphics.
  • tmap for visualizing geospatial data with static maps and leaflet for interactive maps
  • tm and quanteda are the main packages for managing, analyzing, and visualizing textual data.
  • shiny is the basis for truly interactive displays and dashboards in R. However, some measure of interactivity can be achieved with htmlwidgets bringing javascript libraries to R. These include, plotlydygraphshighcharter, and several others.

SAS

General-Purpose Machine Learning

  • Visual Data Mining and Machine Learning - Interactive, automated, and programmatic modeling with the latest machine learning algorithms in and end-to-end analytics environment, from data prep to deployment. Free trial available.
  • Enterprise Miner - Data mining and machine learning that creates deployable models using a GUI or code.
  • Factory Miner - Automatically creates deployable machine learning models across numerous market or customer segments using a GUI.

Data Analysis / Data Visualization

  • SAS/STAT - For conducting advanced statistical analysis.
  • University Edition - FREE! Includes all SAS packages necessary for data analysis and visualization, and includes online SAS courses.

Natural Language Processing

Demos and Scripts

  • ML_Tables - Concise cheat sheets containing machine learning best practices.
  • enlighten-apply - Example code and materials that illustrate applications of SAS machine learning techniques.
  • enlighten-integration - Example code and materials that illustrate techniques for integrating SAS with other analytics technologies in Java, PMML, Python and R.
  • enlighten-deep - Example code and materials that illustrate using neural networks with several hidden layers in SAS.
  • dm-flow - Library of SAS Enterprise Miner process flow diagrams to help you learn by example about specific data mining topics.

Scala

Natural Language Processing

  • ScalaNLP - ScalaNLP is a suite of machine learning and numerical computing libraries.
  • Breeze - Breeze is a numerical processing library for Scala.
  • Chalk - Chalk is a natural language processing library. [Deprecated]
  • FACTORIE - FACTORIE is a toolkit for deployable probabilistic modeling, implemented as a software library in Scala. It provides its users with a succinct language for creating relational factor graphs, estimating parameters and performing inference.
  • Montague - Montague is a semantic parsing library for Scala with an easy-to-use DSL.
  • Spark NLP - Natural language processing library built on top of Apache Spark ML to provide simple, performant, and accurate NLP annotations for machine learning pipelines, that scale easily in a distributed environment.

Data Analysis / Data Visualization

  • MLlib in Apache Spark - Distributed machine learning library in Spark
  • Hydrosphere Mist - a service for deployment Apache Spark MLLib machine learning models as realtime, batch or reactive web services.
  • Scalding - A Scala API for Cascading.
  • Summing Bird - Streaming MapReduce with Scalding and Storm.
  • Algebird - Abstract Algebra for Scala.
  • xerial - Data management utilities for Scala. [Deprecated]
  • PredictionIO - PredictionIO, a machine learning server for software developers and data engineers.
  • BIDMat - CPU and GPU-accelerated matrix library intended to support large-scale exploratory data analysis.
  • Flink - Open source platform for distributed stream and batch data processing.
  • Spark Notebook - Interactive and Reactive Data Science using Scala and Spark.

General-Purpose Machine Learning

  • DeepLearning.scala - Creating statically typed dynamic neural networks from object-oriented & functional programming constructs.
  • Conjecture - Scalable Machine Learning in Scalding.
  • brushfire - Distributed decision tree ensemble learning in Scala.
  • ganitha - Scalding powered machine learning. [Deprecated]
  • adam - A genomics processing engine and specialized file format built using Apache Avro, Apache Spark and Parquet. Apache 2 licensed.
  • bioscala - Bioinformatics for the Scala programming language
  • BIDMach - CPU and GPU-accelerated Machine Learning Library.
  • Figaro - a Scala library for constructing probabilistic models.
  • H2O Sparkling Water - H2O and Spark interoperability.
  • FlinkML in Apache Flink - Distributed machine learning library in Flink.
  • DynaML - Scala Library/REPL for Machine Learning Research.
  • Saul - Flexible Declarative Learning-Based Programming.
  • SwiftLearner - Simply written algorithms to help study ML or write your own implementations.
  • Smile - Statistical Machine Intelligence and Learning Engine.
  • doddle-model - An in-memory machine learning library built on top of Breeze. It provides immutable objects and exposes its functionality through a scikit-learn-like API.
  • TensorFlow Scala - Strongly-typed Scala API for TensorFlow.

Scheme

Neural Networks

Swift

General-Purpose Machine Learning

  • Bender - Fast Neural Networks framework built on top of Metal. Supports TensorFlow models.
  • Swift AI - Highly optimized artificial intelligence and machine learning library written in Swift.
  • BrainCore - The iOS and OS X neural network framework.
  • swix - A bare bones library that includes a general matrix language and wraps some OpenCV for iOS development. [Deprecated]
  • AIToolbox - A toolbox framework of AI modules written in Swift: Graphs/Trees, Linear Regression, Support Vector Machines, Neural Networks, PCA, KMeans, Genetic Algorithms, MDP, Mixture of Gaussians.
  • MLKit - A simple Machine Learning Framework written in Swift. Currently features Simple Linear Regression, Polynomial Regression, and Ridge Regression.
  • Swift Brain - The first neural network / machine learning library written in Swift. This is a project for AI algorithms in Swift for iOS and OS X development. This project includes algorithms focused on Bayes theorem, neural networks, SVMs, Matrices, etc...
  • Perfect TensorFlow - Swift Language Bindings of TensorFlow. Using native TensorFlow models on both macOS / Linux.
  • PredictionBuilder - A library for machine learning that builds predictions using a linear regression.
  • Awesome CoreML - A curated list of pretrained CoreML models.
  • Awesome Core ML Models - A curated list of machine learning models in CoreML format.

TensorFlow

General-Purpose Machine Learning

  • Awesome TensorFlow - A list of all things related to TensorFlow.
  • Golden TensorFlow - A page of content on TensorFlow, including academic papers and links to related topics.

Tools

Neural Networks

  • layer - Neural network inference from the command line

Misc

  • ML Workspace - All-in-one web-based IDE for machine learning and data science. The workspace is deployed as a docker container and is preloaded with a variety of popular data science libraries (e.g., Tensorflow, PyTorch) and dev tools (e.g., Jupyter, VS Code).
  • Notebooks - A starter kit for Jupyter notebooks and machine learning. Companion docker images consist of all combinations of python versions, machine learning frameworks (Keras, PyTorch and Tensorflow) and CPU/CUDA versions.
  • DVC - Data Science Version Control is an open-source version control system for machine learning projects with pipelines support. It makes ML projects reproducible and shareable.

 

 

原文:https://github.com/josephmisiti/awesome-machine-learning

本文:

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A curated list of awesome Machine Learning frameworks, libraries and software.

【首席架构师推荐】免费数据可视化软件

Chinese, Simplified
SEO Title
wikipedia Free data visualization software

【首席架构师推荐】数值分析软件列表

Chinese, Simplified

这里列出了一些值得注意的最终用户计算机应用程序,用于数值或数据分析:

 

Numerical-software packages

  • Analytica is a widely used proprietary tool for building and analyzing numerical models. It is a declarative and visual programming language based on influence diagrams.
  • FlexPro is a program for data analysis and presentation of measurement data. It provides a rich Excel-like user interface and its built-in vector programming language FPScript has a syntax similar to MATLAB.
  • FreeMat, an open-source MATLAB-like environment with a GPL license.
  • GNU Octave is a high-level language, primarily intended for numerical computations. It provides a convenient command-line interface for solving linear and nonlinear problems numerically, and for performing other numerical experiments using a language that is mostly compatible with MATLAB. The 4.0 and newer releases of Octave include a GUI. A number of independently developed Linux programs (CantorKAlgebra) also offer GUI front-ends to Octave. An active community provides technical support to users.
  • Jacket, A proprietary GPU Toolbox for MATLAB, enabling some MATLAB computations to be offloaded to the GPU for acceleration and data visualization purposes.
  • jLab, a research platform for building an open-source MATLAB-like environment in pure Java and Groovy. Currently supports interpreted j-Scripts (MATLAB-like) and compiled GroovySci (extension to Groovy) scripts that provides direct interfacing to Java code and scripting access to many popular Java scientific libraries (e.g. Weka and JSci) and application Wizards.
  • Julia (programming language) is a high-level dynamic language with a surface similarity to MATLAB.
  • LabVIEW offers both textual and graphical-programming approaches to numerical analysis. Its text-based programming language MathScript uses .m-file-script syntax providing some compatibility with MATLAB and its clones.
  • LAPACK provides Fortran 90 routines for solving systems of simultaneous linear equations, least-squares solutions of linear systems of equations, eigenvalue problems, and singular value problems and the associated matrix factorizations (LU, Cholesky, QR, SVD, Schur, and generalized Schur).
  • MATLAB is a widely used proprietary software for performing numerical calculations. It comes with its own programming language, in which numerical algorithms can be implemented.
  • GNU MCSim a simulation and numerical integration package, with fast Monte Carlo and Markov chain Monte Carlo capabilities.
  • ML.NET is a free-software machine-learning library for the C# programming language.[1][2]
  • NAG Library is an extensive software library of highly optimized numerical-analysis routines for various programming environments.
  • O-Matrix
  • pandas is an open-source BSD-licensed library providing data structures and data analysis tools for the Python programming language.
  • Perl Data Language provides large multidimensional arrays for the Perl programming language, and utilities for image processing and graphical plotting.
  • Plotly – Plotting library, Python command line, and graphical interface for analyzing data and creating browser-based graphs. Available for RPythonMATLABJulia, and Perl.
  • Rlab is another free-software computer program which bears a strong resemblance to MATLAB. Rlab development ceased for several years but it was revived as RlabPlus.
  • ScaLAPACK is a library of high-performance linear algebra routines for parallel distributed-memory machines that features functionality similar to LAPACK (solvers for dense and banded linear systems, least-squares problems, eigenvalue problems, and singular-value problem).
  • Scilab is advanced numerical analysis package similar to MATLAB or Octave. Comes with a complete GUI and Xcos which is alternative to Simulink. (free softwareGPL-compatible CeCILL license)
  • Sysquake is a computing environment with interactive graphics for mathematics, physics and engineering. Like other applications from Calerga, it is based on a MATLAB-compatible language.
  • TK Solver is a mathematical modeling and problem-solving software system based on a declarative, rule-based language, commercialized by Universal Technical Systems, Inc.
  • Torch is a deep-learning library with support for manipulation, statistical analysis and presentation of Tensors.
  • XLfit, A plugin to Excel which provides curve-fitting and statistical analysis.

General-purpose computer algebra systems

Main article: List of computer algebra systems

  • Macsyma, a general-purpose computer algebra system, which has a free GPL-licensed version called Maxima.
  • Maple, a general-purpose commercial mathematics software package.
  • Mathcad offers a WYSIWYG interface and the ability to generate publication-quality mathematical equations.
  • Mathematica offers numerical evaluation, optimization and visualization of a very wide range of numerical functions. It also includes a programming language and computer algebra capabilities.
  • PARI/GP is a widely used computer algebra system designed for fast computations in number theory (factorizations, algebraic number theory, elliptic curves...), but also contains a large number of other useful functions to compute with mathematical entities such as matrices, polynomials, power series, algebraic numbers etc., and a lot of transcendental functions. PARI is also available as a C library to allow for faster computations.
  • SageMath is an open-source math software, with a unified Python interface which is available as a text interface or a graphical web-based one. Includes interfaces for open-source and proprietary general purpose CAS, and other numerical analysis programs, like PARI/GP, GAP, gnuplot, Magma, and Maple.
  • Speakeasy is an interactive numerical environment also featuring an interpreted programming language. Born in the mid '60s for matrix manipulation and still in continuous evolution, it pioneered the most common paradigms of this kind of tools, featuring dynamic typing of the structured data objects, dynamic allocation and garbage collection, operators overloading, dynamic linking of compiled or interpreted additional modules contributed by the community of the users and so on.
  • Trilinos is a collection of open-source object-oriented libraries for use in scientific and engineering applications. Trilinos is based on scalable, parallel linear-algebra algorithms.

Interface-oriented

  • Baudline is a time-frequency browser for numerical signals analysis and scientific visualization.
  • COMSOL Multiphysics is a finite-element analysis, solver and simulation software / FEA Software package for various physics and engineering applications, especially coupled phenomena, or multiphysics.
  • Dataplot is provided by NIST.
  • DADiSP is a commercial program focused on DSP that combines the numerical capability of MATLAB with a spreadsheet-like interface.
  • EJS is an open-source software tool, written in Java, for generating simulations.
  • Euler Mathematical Toolbox is a powerful numerical laboratory with a programming language that can handle real, complex and interval numbers, vectors and matrices. It can produce 2D/3D plots.
  • FEATool Multiphysics is a Matlab GUI toolbox for finite element FEM and PDE multiphysics simulations.
  • FEniCS Project is a collection of project for automated solutions to PDEs.
  • Hermes is a C++ library of advanced adaptive finite element algorithms to solve PDEs and multiphysics coupled problems.
  • Fityk is a curve fitting and data-analysis program. Primarily used for peak fitting and analyzing peak data.
  • FlexPro is a commercial program for interactive and automated analysis and presentation of mainly measurement data. It supports many binary instrument data formats and has its own vectorized programming language.
  • IGOR Pro, a software package with emphasis on time series, image analysis, and curve fitting. It comes with its own programming language and can be used interactively.
  • LabPlot is a data analysis and visualization application built on the KDE Platform.
  • MFEM is a free, lightweight, scalable C++ library for finite element methods .
  • Origin, a software package that is widely used for making scientific graphs. It comes with its own C/C++ compiler that conforms quite closely to ANSI standard.
  • PAW is a free data analysis package developed at CERN.
  • SPSS, an application for statistical analysis.
  • QtiPlot is a data analysis and scientific visualisation program, similar to Origin.
  • ROOT is a free object-oriented multi-purpose data-analysis package, developed at CERN.
  • Salome is a free software that provides a generic platform for pre- and post-processing for numerical simulation.
  • Shogun, an open-source large-scale machine-learning toolbox that provides several SVM implementations (like libSVM, SVMlight) under a common framework and interfaces to Octave, MATLAB, Python, R
  • Waffles is a free-software collection of command-line tools designed for scripting machine-learning operations in automated experiments and processes.
  • Weka is a suite of machine learning software written at the University of Waikato.

Language-oriented

  • acslX is a software application for modeling and evaluating the performance of continuous systems described by time-dependent, nonlinear differential equations.
  • ADMB is a software suite for non-linear statistical modeling based on C++ which uses automatic differentiation.
  • AMPL is a mathematical modeling language for describing and solving high complexity problems for large-scale optimization.
  • Ch, a commercial C/C++-based interpreted language with computational array for scientific numerical computation and visualization.[3]
  • APMonitor: APMonitor is a mathematical modeling language for describing and solving representations of physical systems in the form of differential and algebraic equations.
  • Armadillo is C++ template library for linear algebra; includes various decompositions, factorisations, and statistics functions; its syntax (API) is similar to MATLAB.
  • Clojure with numeric libraries Neanderthal, ClojureCUDA, and ClojureCL to call optimized matrix and linear algebra functions on CPU and GPU.
  • Julia is designed for cloud parallel scientific computing in mind on LLVM-based JIT as a backend. Lightweight “green” threading (coroutines). Direct calls of C functions from code (no wrappers or special APIs needed), support for Unicode. Powerful shell-like capabilities for managing other processes. Lisp-like macros and other metaprogramming facilities.
  • ELKI a software framework for development of data mining algorithms in Java.
  • GAUSS, a matrix programming language for mathematics and statistics.
  • GNU Data Language, a free compiler designed as a drop-in replacement for IDL.
  • IDL, a commercial interpreted language based on FORTRAN with some vectorization. Widely used in the solar physicsfusionatmospheric sciences and medical communities. The GNU Data Language is a free alternative.
  • ILNumerics.Net, a C# math library that brings numeric computing functions for science, engineering and financial analysis to the .NET Framework.
  • KPP generates Fortran 90FORTRAN 77C, or Matlab code for the integration of ordinary differential equations (ODEs) resulting from chemical reaction mechanisms.
  • Madagascar, an open-source software package for multidimensional data analysis and reproducible computational experiments.
  • mlpack is an open-source library for machine learning, providing a simple and consistent API, while exploiting C++ language features to provide maximum performance and flexibility
  • NCAR Command Language is an interpreted language designed specifically for scientific data analysis and visualization.
  • O-Matrix - a matrix programming language for mathematics, engineering, science, and financial analysis.
  • OptimJ is a mathematical Java-based modeling language for describing and solving high-complexity problems for large-scale optimization.
  • Perl Data Language, also known as PDL, an array extension to Perl ver.5, used for data manipulation, statistics, numerical simulation and visualization.
  • Python with well-known scientific computing packages: NumPySymPy and SciPy.
  • R is a widely used system with a focus on data manipulation and statistics which implements the S language. Many add-on packages are available (free softwareGNU GPL license).
  • SAS, a system of software products for statistics. It includes SAS/IML[4], a matrix programming language.
  • VisSim is a visual block-diagram language for simulation of nonlinear dynamic systems and model-based embedded development. Its fast ODE engine supports real-time simulation of complex large-scale models. The highly efficient fixed-point code generator allows targeting of low-cost fixed-point embedded processors.
  • Wolfram Language which is used within many Wolfram technologies such as Mathematica and the Wolfram Cloud
  • World Programming System (WPS), supports mixing PythonR and SAS languages in a single-user program for statistical analysis and data manipulation
  • Yorick is an interpreted programming language designed for numerics, graph plotting and simulation.

Historically significant

  • Expensive Desk Calculator written for the TX-0 and PDP-1 in the late 1950s or early 1960s.
  • S is an (array-based) programming language with strong numerical support. R is an implementation of the S language.

See also

 

原文:https://en.wikipedia.org/wiki/List_of_numerical-analysis_software

本文:https://pub.intelligentx.net/wikipedia-list-numerical-analysis-software

讨论:请加入知识星球或者小红圈【首席架构师圈】

 

 

SEO Title
wikipedia List of numerical-analysis software

【首席架构师推荐】数值计算库一览表

Chinese, Simplified

这是一个著名的数值库列表,这些库用于软件开发中执行数值计算。它不是一个完整的列表,而是一个包含Wikipedia上文章的数字库列表,很少有例外。

典型库的选择取决于一系列不同的需求,例如:期望的特性(例如:大维线性代数、并行计算、偏微分方程)、商业/开源性质、API的可读性、可移植性或平台/编译器依赖性(例如:Linux、Windows、Visual c++、GCC)、速度性能、易用性、开发人员的持续支持、标准遵从性、针对特定应用程序场景的代码的专门优化,甚至要安装的代码库的大小。

由于我们发现很少有全面的调查可用,所以在许多可能的库中几乎总是(至少最初是)有一个艰难的选择。通常情况下,它往往是由用户根据自己的品味和舒适度来决定的,只是因为缺乏适当的信息。

 

Multi-language

  • ALGLIB is an open source numerical analysis library which may be used from C++, C#, FreePascal, Delphi, VBA.
  • ArrayFire is a high performance open source software library for parallel computing with an easy-to-use API.
  • IMSL Numerical Libraries are libraries of numerical analysis functionality implemented in standard programming languages like C, Java, C# .NET, Fortran, and Python.
  • The NAG Library is a collection of mathematical and statistical routines for multiple programming languages (C, C++, Fortran, Visual Basic, Java, Python and C#) and packages (MATLAB, Excel, R, LabVIEW).
  • GNU Octave is an open source high level programming language and library, including a command line interface and GUI, analogous to commercial alternatives such as Maple, MATLAB, Mathematica, etc. APIs, functions and libraries can be called from many platforms, including high level engineering programs, where functions are, in many cases, seamlessly interpreted and integrated in similar fashion to MATLAB. It also can be used with batch orientation.
  • librsb is an open source library for high performance sparse matrix computations providing multi-threaded primitives to build iterative solvers (implements also the Sparse BLAS standard). It can be used from C, C++, Fortran, and a dedicated GNU Octave package.

C

C++

  • Adept is a combined automatic differentiation and array library.
  • Advanced Simulation Library is free and open source hardware accelerated multiphysics simulation software with an OpenCL-based internal computational engine.
  • ALGLIB is an open source / commercial numerical analysis library with C++ version
  • Armadillo is a C++ linear algebra library (matrix and vector maths), aiming towards a good balance between speed and ease of use. It employs template classes, and has optional links to BLAS and LAPACK. The syntax (API) is similar to MATLAB.
  • Blaze is an open-source, high-performance C++ math library for dense and sparse arithmetic.
  • Blitz++ is a high-performance vector mathematics library written in C++.
  • Boost.uBLAS C++ libraries for numerical computation
  • deal.II is a library supporting all the finite element solution of partial differential equations.
  • Dlib is a modern C++ library with easy to use linear algebra and optimization tools which benefit from optimized BLAS and LAPACK libraries.
  • Eigen is a vector mathematics library with performance comparable with Intel's Math Kernel Library
  • Hermes Project: C++/Python library for rapid prototyping of space- and space-time adaptive hp-FEM solvers.
  • IML++ is a C++ library for solving linear systems of equations, capable of dealing with dense, sparse, and distributed matrices.
  • IT++ is a C++ library for linear algebra (matrices and vectors), signal processing and communications. Functionality similar to MATLAB and Octave.
  • LAPACK++, a C++ wrapper library for LAPACK and BLAS
  • Intel MKL, Intel Math Kernel Library (in C and C++), a library of optimized math routines for science, engineering, and financial applications, written in C/C++ and Fortran. Core math functions include BLAS, LAPACK, ScaLAPACK, sparse solvers, fast Fourier transforms, and vector math.
  • mlpack is an open-source library for machine learning, exploiting C++ language features to provide maximum performance and flexibility while providing a simple and consistent API
  • MTL4 is a generic C++ template library providing sparse and dense BLAS functionality. MTL4 establishes an intuitive interface (similar to MATLAB) and broad applicability thanks to Generic programming.
  • The NAG Library has C++ API
  • NTL is a C++ library for number theory.
  • Trilinos is an effort to develop algorithms and enabling technologies for the solution of large-scale, complex multi-physics engineering and scientific problems. It is a collection of packages.

Delphi

  • Analytics & Physics: commercial Delphi libraries for symbolic and numerical calculations (including symbolic derivatives) and working with physical values and units of measurement.
  • ALGLIB - an open source numerical analysis library.

.NET Framework languages C#F#VB.NET and PowerShell[edit]

  • Accord.NET is a collection of libraries for scientific computing, including numerical linear algebra, optimization, statistics, artificial neural networks, machine learning, signal processing and computer vision. LGPLv3, partly GPLv3.
  • AForge.NET is a computer vision and artificial intelligence library. It implements a number of genetic, fuzzy logic and machine learning algorithms with several architectures of artificial neural networks with corresponding training algorithms. LGPLv3 and partly GPLv3.
  • ALGLIB is an open source numerical analysis library with C# version. Dual licensed: GPLv2+, commercial license.
  • ILNumerics.Net Commercial high performance, typesafe numerical array classes and functions for general math, FFT and linear algebra, aims .NET/mono, 32&64 bit, script-like syntax in C#, 2D & 3D plot controls, efficient memory management.
  • IMSL Numerical Libraries have C# version (commercially licensed). IMSL .Net have announced end of life at the end of 2020.
  • Math.NET Numerics aims to provide methods and algorithms for numerical computations in science, engineering and every day use. Covered topics include special functions, linear algebra, probability models, random numbers, interpolation, integral transforms and more. Free software under MIT/X11 license.
  • Measurement Studio is a commercial integrated suite UI controls and class libraries for use in developing test and measurement applications. The analysis class libraries provide various digital signal processing, signal filtering, signal generation, peak detection, and other general mathematical functionality.
  • ML.NET is a free software machine learning library for the C# programming language.[1][2]
  • The NAG Library has C# API. Commercially licensed.
  • NMath by CenterSpace Software: Commercial numerical component libraries for the .NET platform, including signal processing (FFT) classes, a linear algebra (LAPACK & BLAS) framework, and a statistics package.
  • Numpy.NET offers C# language bindings for NumPy a fundamental library for scientific computing, machine learning and AI.[3] Numpy.NET is free software under MIT license.
  • NumSharp is an open source N-D Tensor computation library for Data Science, Machine Learning and AI, written in pure C#.[4] NumSharp is free software licensed under the Apache 2.0 license.

Fortran

Java

Scala

  • ND4S is a scientific computing library for Scala that includes support for n-dimensional arrays on the JVM.

Perl

  • Perl Data Language gives standard Perl the ability to compactly store and speedily manipulate the large N-dimensional data arrays.

Python

  • NumPy, a BSD-licensed library that adds support for the manipulation of large, multi-dimensional arrays and matrices; it also includes a large collection of high-level mathematical functions. NumPy serves as the backbone for a number of other numerical libraries, notably SciPy. De facto standard for matrix/tensor operations in Python.
  • SageMath is a large mathematical software application which integrates the work of nearly 100 free software projects and supports linear algebra, combinatorics, numerical mathematics, calculus, and more.
  • SciPy, a large BSD-licensed library of scientific tools. De facto standard for scientific computations in Python.
  • ScientificPython, a library with a different set of scientific tools
  • SymPy , a library based on New BSD license for symbolic computation. Features of Sympy range from basic symbolic arithmetic to calculus, algebra, discrete mathematics and quantum physics.

Others

See also

 

原文:https://en.wikipedia.org/wiki/List_of_numerical_libraries

本文:https://pub.intelligentx.net/wikipedia-list-numerical-libraries

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wikipedia List of numerical libraries

【首席架构师推荐】文本挖掘软件列表

Chinese, Simplified

文本挖掘计算机程序可从许多商业和开放源码公司和源代码获得。

 

Commercial

  • Amenity Analytics – develops cloud-based text analytics solutions using natural language processing and machine learning to draw insights at scale from any source of unstructured data.
  • Angoss – Angoss Text Analytics provides entity and theme extraction, topic categorization, sentiment analysis and document summarization capabilities via the embedded
  • AUTINDEX - is a commercial text mining software package based on sophisticated linguistics by IAI (Institute for Applied Information Sciences), Saarbrücken.
  • Autonomy – text mining, clustering and categorization software
  • Averbis – provides text analytics, clustering and categorization software, as well as terminology management and enterprise search
  • Basis Technology – provides a suite of text analysis modules to identify language, enable search in more than 20 languages, extract entities, and efficiently search for and translate entities.
  • Clarabridge – text analytics (text mining) software, including natural language (NLP), machine learning, clustering and categorization. Provides SaaS, hosted and on-premises text and sentiment analytics that enables companies to collect, listen to, analyze, and act on the Voice of the Customer (VOC) from both external (Twitter, Facebook, Yelp!, product forums, etc.) and internal sources (call center notes, CRM, Enterprise Data Warehouse, BI, surveys, emails, etc.).
  • DigitalMR - social media listening & text+image analytics tool for market research
  • Endeca Technologies – provides software to analyze and cluster unstructured text.
  • FICO Score – leading provider of analytics.
  • General Sentiment - Social Intelligence platform that uses natural language processing to discover affinities between the fans of brands with the fans of traditional television shows in social media. Stand alone text analytics to capture social knowledge base on billions of topics stored to 2004.
  • IBM LanguageWare - the IBM suite for text analytics (tools and Runtime).
  • IBM SPSS - provider of Modeler Premium (previously called IBM SPSS Modeler and IBM SPSS Text Analytics), which contains advanced NLP-based text analysis capabilities (multi-lingual sentiment, event and fact extraction), that can be used in conjunction with Predictive Modeling. Text Analytics for Surveys provides the ability to categorize survey responses using NLP-based capabilities for further analysis or reporting.
  • Inxight – provider of text analytics, search, and unstructured visualization technologies. (Inxight was bought by Business Objects that was bought by SAP AG in 2008).
  • Language Computer Corporation – text extraction and analysis tools, available in multiple languages.
  • Lexalytics - provider of a text analytics engine used in Social Media Monitoring, Voice of Customer, Survey Analysis, and other applications. Salience Engine. The software provides the unique capability of merging the output of unstructured, text-based analysis with structured data to provide additional predictive variables for improved predictive models and association analysis.
  • LexisNexis – provider of business intelligence solutions based on an extensive news and company information content set. LexisNexis acquired DataOps to pursue search
  • Linguamatics – provider of natural language processing (NLP) based enterprise text mining and text analytics software, I2E, for high-value knowledge discovery and decision support.
  • Luminoso – enterprise feedback and text analytics solutions developed over a decade of natural language processing (NLP), machine learning and artificial intelligence research at MIT Media Lab. Enables clients to understand, measure and act on large amounts of consumer feedback, across multiple channels.[1][2]
  • Mathematica – provides built in tools for text alignment, pattern matching, clustering and semantic analysis. See Wolfram Language, the programming language of Mathematica.
  • MATLAB offers Text Analytics Toolbox for importing text data, converting it to numeric form for use in machine and deep learning, sentiment analysis and classification tasks.[3]
  • MeaningCloud - formerly known as Textalytics: a set of text analytics APIs offered both in SaaS mode and on-premises that are totally customizable to obtain the highest accuracy and very easy to integrate in any system or environment thanks to its SDKs and plug-ins.
  • Medallia - offers one system of record for survey, social, text, written and online feedback.
  • Megaputer Intelligence - derives actionable knowledge from large volumes of text and structured data, including natural language processing (NLP), machine learning, sentiment analysis, entity extraction, clustering, and categorization.
  • NetOwl – suite of multilingual text and entity analytics products, including entity extraction, link and event extraction, sentiment analysis, geotagging, name translation, name matching, and identity resolution, among others.
  • PoolParty Semantic Suite lets you develop a knowledge graph – thus structure and represent your prioritised knowledge domains. The highly performative PoolParty service extracts entities and terms following a sophisticated text mining algorithm.
  • RapidMiner with its Text Processing Extension – data and text mining software.
  • SAS – SAS Text Miner and Teragram; commercial text analytics, natural language processing, and taxonomy software used for Information Management.
  • Semantria - offers its services via API and Excel plugin. It is a spinoff of text-analysis software Lexalytics, but differs in that it is offered via API and Excel plugin, and in that it incorporates a bigger knowledge base and uses deep learning.
  • Sketch Engine - a corpus manager and analysis software which providing creating text corpora from uploaded texts or the Web including part-of-speech tagging and lemmatization or detecting a particular website.[4]
  • Smartlogic – Semaphore; Content Intelligence platform containing commercial text analytics, natural language processing, rule-based classification, ontology/taxonomy modelling and information visualization software used for Information Management.
  • StatSoft – provides STATISTICA Text Miner as an optional extension to STATISTICA Data Miner, for Predictive Analytics Solutions.
  • Sysomos - provider social media analytics software platform, including text analytics and sentiment analysis on online consumer conversations.
  • WordStat - Content analysis and text mining add-on module of QDA Miner for analyzing large amounts of text data.

Open source

  • Carrot2 – text and search results clustering framework.
  • Coding Analysis Toolkit – CAT is a free, web-based, and open source text analysis service. Load, code, and annotate text data in teams. Measure inter-rater reliability and adjudicate differences between coders. Report on the accuracy of codes and coders over time. Train better coders through systematic iterations.
  • GATE – general Architecture for Text Engineering, an open-source toolbox for natural language processing and language engineering.
  • Gensim - large-scale topic modelling and extraction of semantic information from unstructured text (Python).
  • Natural Language Toolkit (NLTK) – a suite of libraries and programs for symbolic and statistical natural language processing (NLP) for the Python programming language.
  • OpenNLP - natural language processing.
  • Orange with its text mining add-on.
  • Stanbol - an open source text mining engine targeted at semantic content management.
  • The programming language R provides a framework for text mining applications in the package tm.[5] The Natural Language Processing task view contains tm and other text mining library packages.[6]
  • The KNIME Text Processing extension.
  • The PLOS Text Mining Collection.[7]
  • Voyant Tools - a web-based text analysis environment, created as a scholarly project.
  • spaCy - open-source Natural Language Processing library for Python

References

  1. ^ Alba, Davet (12 February 2015). "The Startup That Helps You Analyze Twitter Chatter in Real Time". Wired. Retrieved 4 March 2015.
  2. ^ Lohr, Steve (27 June 2014). "The U.S.-Germany Match Through a Social Media Lens". New York Times. Retrieved 4 March 2015.
  3. ^ "Text Analytics Toolbox"www.mathworks.com. Retrieved 2019-07-10.
  4. ^ "Text analysis with Sketch Engine"Sketch Engine. LEXICAL COMPUTING CZ s.r.o. Retrieved 17 January 2018.
  5. ^ Introduction to the tm Package: Text Mining in R
  6. ^ CRAN Task View: Natural Language Processing
  7. ^ "Table of Contents: Text Mining". PLOS.

External links

 

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【首席架构师推荐】深度学习软件比较

Chinese, Simplified

下表比较了用于深度学习的著名软件框架、库和计算机程序。

Deep-learning software by name

Software

Initial Release

Software license[a]

Open source

Platform

Written in

Interface

OpenMP 

support

OpenCL

 support

CUDA support

Automatic differentiation[1]

Has pretrained models

Recurrent nets

Convolutional nets

RBM/DBNs

Parallel execution (multi node)

Actively Developed

BigDL 2016 Apache 2.0 Yes

Apache

Spark

Scala

Scala,

Python

    No   Yes Yes Yes      
Caffe 2013 BSD Yes

Linux

macOS

Windows[2]

C++

Python

MATLAB

C++

Yes

Under

development[3]

Yes Yes Yes[4] Yes Yes No ?  
Chainer 2015 BSD Yes

Linux

macOS

Python Python No No Yes Yes Yes Yes Yes No Yes Yes
Deeplearning4j 2014 Apache 2.0 Yes

Linux

macOS

Windows,

 Android 

(Cross-

platform)

C++

Java

Java

Scala

Clojure

Python 

(Keras), 

Kotlin

Yes No[5] Yes[6][7] Computational Graph Yes[8] Yes Yes Yes Yes[9]  
Dlib 2002 Boost Software License Yes

Cross-

Platform

C++ C++ Yes No Yes Yes Yes No Yes Yes Yes  
Intel Data Analytics Acceleration Library 2015 Apache License 2.0 Yes

Linux

macOS

Windows 

on Intel 

CPU[10]

C++

Python

Java

C++

Python

Java[10]

Yes No No Yes No   Yes   Yes  
Intel Math Kernel Library   Proprietary No

Linux,

 macOS

Windows 

on Intel 

CPU[11]

  C[12] Yes[13] No No Yes No Yes[14] Yes[14]   No  
Keras 2015 MIT license Yes

Linux

macOS

Windows

Python

Python

R

Only if using Theano as backend

Can use

Theano,

Tensorflow

or PlaidML

as backends

Yes Yes Yes[15] Yes Yes No[16] Yes[17] Yes
MATLAB + Deep Learning Toolbox   Proprietary No

Linux,

 macOS

Windows

C

C++

Java

MATLAB

MATLAB No No Train with Parallel Computing Toolbox and generate CUDA code with GPU Coder[18] No Yes[19][20] Yes[19] Yes[19] No With Parallel Computing Toolbox[21] Yes
Microsoft Cognitive Toolkit (CNTK) 2016 MIT license[22] Yes

Windows

Linux[23] 

(macOS 

via Docker

on roadmap)

C++

Python

(Keras), 

C++,

 Command

line,[24] 

BrainScript[25] 

(.NET on

roadmap[26])

Yes[27] No Yes Yes Yes[28] Yes[29] Yes[29] No[30] Yes[31] No[32]
Apache MXNet 2015 Apache 2.0 Yes

Linux

macOS

Windows,[33][34] 

AWS

Android,[35] 

iOS

JavaScript[36]

Small

 C++ 

core

library

C++

Python

Julia

Matlab

JavaScript,

 Go

R

Scala

Perl

Yes

On

roadmap[37]

Yes Yes[38] Yes[39] Yes Yes Yes Yes[40] Yes
Neural Designer   Proprietary No

Linux

macOS

Windows

C++

Graphical

user

interface

Yes No No ? ? No No No ?  
OpenNN 2003 GNU LGPL Yes

Cross

-platform

C++ C++ Yes No Yes ? ? No No No ?  
PlaidML 2017 AGPL Yes

Linux

macOS

Windows

Python,

 C++

OpenCL

Python,

 C++

?

Some

OpenCL

ICDs are

not recognized

No Yes Yes Yes Yes   Yes Yes
PyTorch 2016 BSD Yes

Linux,

 macOS

Windows

Python,

 C

C++

CUDA

Python,

 C++

Yes

Via separately maintained

package

[41]

[42][42]

Yes Yes Yes Yes Yes   Yes Yes
Apache SINGA 2015 Apache 2.0 Yes

Linux

macOS,

 Windows

C++

Python

C++

Java

No

Supported

in V1.0

Yes ? Yes Yes Yes Yes Yes  
TensorFlow 2015 Apache 2.0 Yes

Linux

macOS

Windows,[43] 

Android

C++,

 Python

CUDA

Python 

(Keras), 

C/C++

JavaGo

JavaScript,

 R,[44] 

Julia

Swift

No

On roadmap

[45] but

already with

 SYCL[46] 

support

Yes Yes[47] Yes[48] Yes Yes Yes Yes Yes
Theano 2007 BSD Yes

Cross

-platform

Python

Python 

(Keras)

Yes

Under develo

pment[49]

Yes Yes[50][51] Through Lasagne's model zoo[52] Yes Yes Yes Yes[53] No
Torch 2002 BSD Yes

Linux

macOS

Windows,[54] 

Android,[55] 

iOS

CLua

Lua

LuaJIT,

[56] C,

utility

library for

 C++/

OpenCL[57]

Yes

Third

party

implemen

tations[58][59]

Yes[60][61] Through Twitter's Autograd[62] Yes[63] Yes Yes Yes Yes[54] No
Wolfram Mathematica 1988 Proprietary No

Windows,

 macOS

Linux

Cloud computing

C++

Wolfram

Language

CUDA

Wolfram Language Yes No Yes Yes Yes[64] Yes Yes Yes Yes[65] Yes
  1. ^ Licenses here are a summary, and are not taken to be complete statements of the licenses. Some libraries may use other libraries internally under different licenses

Related software

See also

 

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【首席架构师推荐】精选优化软件清单

Chinese, Simplified

给定一个输入和输出值之间的转换,描述一个数学函数f,优化处理生成和选择一个最佳解决方案从一些组可用的替代方案,通过系统地选择输入值在一个允许集,计算的输出功能,录音过程中发现的最好的输出值。许多实际问题都可以用这种方法建模。例如,输入可以是电机的设计参数,输出可以是功耗,或者输入可以是业务选择,输出可以是获得的利润。

优化问题,在本例中是最小化问题,可以用以下方式表示

给定:一个函数f:一个{\displaystyle \to}\to R,从某个集合a到实数

搜索:A中的一个元素x0,使得f(x0)≤f(x)对于A中的所有x。

在连续优化中,A是欧氏空间Rn的某个子集,通常由一组约束、等式或不等式来指定,这些约束、等式或不等式是A的成员必须满足的。在组合优化中,A是离散空间的某个子集,如二进制字符串、排列或整数集。

优化软件的使用要求函数f用合适的编程语言定义,并在编译或运行时连接到优化软件。优化软件将在A中提供输入值,实现f的软件模块将提供计算值f(x),在某些情况下,还将提供关于函数的附加信息,如导数。

这样就得到了一个清晰的关注点分离:不同的优化软件模块可以很容易地在同一个函数f上进行测试,或者给定的优化软件可以用于不同的函数f。

下表提供了根据许可证和业务模型类型组织的值得注意的优化软件列表。

 

Free and open-source software

Applications
Name License Description
ADMB BSD nonlinear optimization framework, using automatic differentiation.
ASCEND GPL mathematical modelling chemical process modelling system.
CUTEr GPL a testing environment for optimization and linear algebra solvers.
GNU_Octave GPL a software package featuring a high-level programming language, primarily intended for numerical computations; well recognized free alternative to MATLAB.
Scilab CeCILL a cross-platform numerical computational package and a high-level, numerically oriented programming language with free numerical optimization framework.
Software libraries
Name License Description
ALGLIB GPL dual licensed (GPL/commercial) nonlinear optimization library (unconstrained, box, linearly, nonlinearly-constrained, nonlinear and QP problems), optionally using automatic differentiation. Cross-language: C++, C#.
COIN-OR SYMPHONY EPL 1.0 integer programming
Dlib Boost Software License Unconstrained/box-constrained nonlinear/QP optimization library written in C++.
GEKKO MIT License machine learning and optimization of mixed-integer and differential algebraic equations in Python.
GLPK GPL GNU Linear Programming Kit, C API.
IPOPT CPL a large scale nonlinear optimizer for continuous systems (requires gradient), C++ (formerly Fortran and C).
J. D. Powell's

optimization suite
LGPL a set of Fortran 95 algorithms for (derivative-free, DFO) optimization subject to box and linear constraints: BOBYQA – DFO, box; COBYLA – DFO, nonlinearly constrained; LINCOA – DFO, linearly constrained; NEWUOA and UOBYQA – DFO, unconstrained; TOLMIN – linearly constrained.
MIDACO Dual (Commercial, BY-NC-ND) a lightweight software tool for single- and multi-objective optimization based on evolutionary computing. Written in C/C++ and Fortran with gateways to Excel, VBA, Java, Python, Matlab, Octave, R, C# and Julia.
MINUIT (now MINUIT2) LGPL an unconstrained optimizer internally developed at CERN.
OpenMDAO Apache License Multidisciplinary Design, Analysis, and Optimization (MDAO) framework, written in Python. The development is led out of the NASA Glenn Research Center, with support from the NASA Langley Research Center.
OptaPlanner Apache License a lightweight, embeddable planning engine written in Java. It solves constraint satisfaction problems with construction heuristics and metaheuristic algorithms.
SciPy BSD a general numeric package for Python, with some support for optimization.

Proprietary software

  • AIMMS – optimization modeling system, including GUI building facilities.
  • ALGLIB – dual licensed (GPL/commercial) constrained quadratic and nonlinear optimization library with C++ and C# interfaces.
  • Altair HyperStudy – design of experiments and multi-disciplinary design optimization.
  • AMPL – modelling language for large-scale linear, mixed integer and nonlinear optimization.
  • ANTIGONE – a deterministic global optimization MINLP solver.
  • APMonitor – modeling language and optimization suite for large-scale, nonlinear, mixed integer, differential and algebraic equations with interfaces to MATLAB, Python, and Julia.
  • Artelys Knitro – large scale nonlinear optimization for continuous and mixed-integer programming.
  • ASTOS – AeroSpace Trajectory Optimization Software for launcher, re-entry and generic aerospace problems.
  • BARON – optimization of algebraic nonlinear and mixed-integer nonlinear problems.
  • COMSOL Multiphysics – a cross-platform finite element analysis, solver and multiphysics simulation software.
  • CPLEX – integer, linear and quadratic programming.
  • FEATool Multiphysics – FEA GUI Toolbox for MATLAB
  • FICO Xpress – integer, linear and quadratic and nonlinear programming.
  • FortMP – integer, linear and quadratic programming.
  • FortSP – stochastic programming.
  • GAMS – General Algebraic Modeling System.
  • Gurobi – integer, linear and quadratic programming.
  • HEEDS MDO – multidisciplinary design optimization using SHERPA, a hybrid, adaptive optimization algorithm.
  • IMSL Numerical Libraries – linear, quadratic, nonlinear, and sparse QP and LP optimization algorithms implemented in standard programming languages C, Java, C# .NET, Fortran, and Python.
  • IOSO – (Indirect Optimization on the basis of Self-Organization) a multiobjective, multidimensional nonlinear optimization technology.
  • Kimeme – an open platform for multi-objective optimization and multidisciplinary design optimization.
  • LINDO - (Linear, Interactive, and Discrete Optimizer) a software package for linear programming, integer programming, nonlinear programming, stochastic programming, and global optimization. The "What's Best!" Excel add-in performs linear, integer, and nonlinear optimization using LINDO.
  • LIONsolver – an integrated software for data mininganalyticsmodeling Learning and Intelligent OptimizatioN and reactive business intelligence approach.
  • modeFRONTIER – an integration platform for multi-objective and multi-disciplinary optimization, which provides a seamless coupling with third party engineering tools, enables the automation of the design simulation process, and facilitates analytic decision making.
  • Maple – linear, quadratic, and nonlinear, continuous and integer optimization. Constrained and unconstrained. Global optimization with add-on toolbox.
  • MATLAB – linear, integer, quadratic, and nonlinear problems with Optimization Toolbox; multiple maxima, multiple minima, and non-smooth optimization problems; estimation and optimization of model parameters.
  • MIDACO a lightweight software tool for single- and multi-objective optimization based on evolutionary computing. Written in C/C++ and Fortran with gateways to Excel, VBA, Java, Python, Matlab, Octave, R, C# and Julia.
  • Mathematica – large-scale multivariate constrained and unconstrained, linear and nonlinear, continuous and integer optimization.
  • ModelCenter – a graphical environment for integration, automation, and design optimization.
  • MOSEK – linear, quadratic, conic and convex nonlinear, continuous and integer optimization.
  • NAG – linear, quadratic, nonlinear, sums of squares of linear or nonlinear functions; linear, sparse linear, nonlinear, bounded or no constraints; local and global optimization; continuous or integer problems.
  • NMath – linear, quadratic and nonlinear programming.
  • OptimJ – Java-based modeling language. Premium Edition includes support for Gurobi, Mosek and CPLEX solvers.
  • Optimus platform – a process integration and design optimization platform developed by Noesis Solutions.
  • optiSLang – software solutions for CAE-based sensitivity analysis, optimization and robustness evaluation.
  • OptiY - a design environment providing modern optimization strategies and state of the art probabilistic algorithms for uncertainty, reliability, robustness, sensitivity analysis, data-mining and meta-modeling.
  • OptiStruct – award-winning CAE technology for conceptual design synthesis and structural optimization.
  • PottersWheel – parameter estimation in ordinary differential equations (MATLAB toolbox, free for academic use).
  • pSeven — software platform for automation of engineering simulation and analysis, multidisciplinary optimization and data mining, developed by DATADVANCE.
  • SAS – a software suite developed by SAS Institute for advanced analytics (statistics, forcasting, machine learning, optimization, etc.), business intelligence, customer intelligence, data management, risk management, and many more.
  • SmartDO – multidisciplinary global design optimization, specialized in computer-aided engineering (CAE). using the direct global search approaches.
  • SNOPT – large-scale optimization problems.
  • The Unscrambler X – product formulation and process optimization software.
  • TOMLAB – supports global optimization, integer programming, all types of least squares, linear, quadratic and unconstrained programming for MATLAB. TOMLAB supports solvers like GurobiCPLEXSNOPTKNITRO and MIDACO.
  • VisSim – a visual block diagram language for simulation and optimization of dynamical systems.
  • WORHP – a large-scale sparse solver for continuous nonlinear optimization.

Freeware/free for academic use

See also

 

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【首席架构师推荐】精选免费数据分析软件

【首席架构师推荐】精选数据分析软件列表

Chinese, Simplified

精选数据分析软件列表

 

A

B

C

D

E

F

G

H

I

J

K

L

M

N

O

P

R

S

T

U

W

X

 

原文:https://en.wikipedia.org/wiki/Category:Data_analysis_software

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【首席架构师推荐】精选数据挖掘和机器学习软件列表

Chinese, Simplified

精选数据挖掘和机器学习软件列表

A

B

C

D

E

F

G

I

J

K

L

M

N

O

P

R

S

T

U

V

W

X

Y

Z

 

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【首席架构师推荐】统计软件一览表

Chinese, Simplified

统计软件是专门用于统计和计量经济学分析的计算机程序。

Open-source

 

Public domain

Freeware

Proprietary

Add-ons

See also

 

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【首席架构师推荐】统计软件包比较

Chinese, Simplified

下表比较了若干统计分析包的一般资料和技术资料。

General information

Product Developer Latest version Open source Software license Interface Written in Scripting languages
ADaMSoft Marco Scarno 27 April 2015 Yes GNU GPL CLIGUI Java  
Alteryx Alteryx Inc. 2019.2 (June 2019) No Proprietary GUI, Python SDK, js SDK C#, C++, Python, R, js R, Python
Analyse-it Analyse-it   No Proprietary GUI C#, C++, Fortran  
ASReml VSN International 26 March 2014 No Proprietary CLI    
BMDP Statistical Solutions   No Proprietary      
Dataplot Alan Heckert 2013 Yes Public domain CLIGUI Fortran  
ELKI Ludwig Maximilian University of Munich 0.7.5 (15 February 2019) Yes AGPL CLIGUI Java Shell (computing)
Epi Info Centers for Disease Control and Prevention 27 June 2016 Yes Public domain CLIGUI Microsoft C#  
EViews IHS 23 March 2015 No Proprietary CLIGUI    
GAUSS Aptech Systems 2019 No Proprietary CLIGUI C, C++  
GenStat VSN International 2015 No Proprietary CLIGUI    
GraphPad Prism GraphPad Software, Inc. February 2009 No Proprietary GUI    
gretl The gretl Team 2019c (2 July 2019) Yes GNU GPL CLIGUI C hansl
JASP JASP team 0.92 (10 December 2018) Yes GNU GPL GUI C++  
JMP SAS Institute 14.3 (March 2019) No Proprietary GUICLI   JSL (JMP Scripting Language)
LIMDEP Econometric Software, Inc., William Greene May 2012 No Proprietary CLIGUI Fortran, C++  
Maple Maplesoft 2019.1 (May 28, 2019; 3 months ago) [±][1] No Proprietary CLIGUI    
Mathematica Wolfram Research 12.0.0 (April 16, 2019; 5 months ago) [±][2] No Proprietary CLIGUI C, Mathematica  
MATLAB MathWorks R2018b (12 September 2018) No Proprietary CLIGUI C++, Java, MATLAB  
MaxStat Pro MaxStat Software Pro 3.6 No Proprietary GUI VB.net, C++, C#  
MedCalc MedCalc Software bvba 7 May 2019 No Proprietary GUI    
Minitab Minitab Inc. 7 June 2017 No Proprietary CLIGUI    
NCSS NCSS, LLC February 2015 No Proprietary GUI    
NLOGIT Econometric Software, Inc., William Greene May 2012 No Proprietary CLIGUI Fortran,C++  
NMath Stats CenterSpace Software November 2009 No Proprietary CLI    
NumXL Spider Financial 14 June 2016 No Proprietary GUI C++, VBA C, C++, C#, VB, VBA, .NET
OpenEpi A. Dean, K. Sullivan, M. Soe 22 September 2014 Yes GNU GPL GUI JavaScript, HTML  
Orange Bioinformatics Laboratory, Faculty of Computer and Information Science, University of Ljubljana 10 January 2016 Yes GNU GPL GUI/Python Python, Cython Python
Origin OriginLab 28 October 2014 No Proprietary GUI C++ LabTalk
Ox programming language OxMetrics, J.A. Doornik August 2011 No Proprietary CLI    
OxMetrics OxMetrics, J.A. Doornik August 2011 No Proprietary CLI/GUI    
Primer Primer-E February 2007 No Proprietary GUI    
PSPP GNU Project 1.2.0 (6 November 2018)[3] Yes GNU GPL CLIGUI C Perl (by PSPP-Perl[4])
R R Foundation 3.5.2 (20 December 2018) Yes GNU GPL CLIGUI[5] C, Fortran, R[6] R languagePython (by RPy), Perl (by Statistics::R module)
RKWard RKWard community 0.7.0 (16 April 2018) [7] Yes GNU GPL CLIGUI C++, ECMAScript R languagePython (by RPy), Perl (by Statistics::R module)
Revolution Analytics Norman Nie 2007 Yes Proprietary CLIGUI    
RATS Estima 1 October 2010 No Proprietary CLIGUI    
ROOT ROOT Analysis Framework 4 November 2016 Yes GNU GPL GUI C++ C++, Python
SageMath >100 developers worldwide 8.8 (27 June 2019; 2 months ago) [±][8] Yes GNU GPL CLI & GUI Python, Cython Python
Salstat Alan J. Salmoni, Mark Livingstone 16 May 2014 Yes GNU GPL CLI & GUI PythonNumPySciPy Python
SAS SAS Institute 9.4M6 (November 2018),

Viya 3.4 (September 2018)
No Proprietary CLI & GUI C SAS language, CAS Language (CASL), APIs for R languagePythonLuaJava
SciPy Enthought 1.3.1 (9 August 2019) Yes BSD CLI PythonCFortran Python
SHAZAM SHAZAM Analytics Ltd 11.1.4 (April 2015) No Proprietary CLIGUI FORTRAN, C++, C  
SigmaXL SigmaXL Inc. 11 March 2019 No Proprietary GUI    
Skytree Infinity Skytree, Inc. 26 October 2010 No Proprietary CLIGUIJava SDKPython SDK C++ ShellPython
SOCR UCLA and University of Michigan 3.0 (10 May 2015) Yes LGPL GUI Java  
SOFA Statistics Grant Paton-Simpson 1.5.2 (7 July 2019) Yes AGPL GUI Python Python
SPlus Insightful Inc. 2010 No Proprietary CLI    
SPSS IBM 24.0 (15 March 2016) No Proprietary CLIGUI Java R, Python, SaxBasic
Stata StataCorp LLC 26 June 2019 No Proprietary CLIGUI C ado, Mata
StatCrunch Pearson Education July 2017 No Proprietary GUI    
Statgraphics Statpoint Technologies Incorporated September 2014 No Proprietary GUI C++  
Statistica Dell Software September 2015 No Proprietary GUI C++ R, Statistica Visual Basic (SVB)
StatPlus AnalystSoft 7 January 2007 No Proprietary GUI    
Statsmodels Statsmodels Developers 0.9.0 (12 May 2018) Yes BSD CLI PythonC Python
SYSTAT Systat Software Inc. 21 February 2007 No Proprietary CLIGUI    
TSP TSP International September 2009 No Proprietary CLI Fortran  
UNISTAT Unistat Ltd 8 April 2011 No Proprietary GUIExcel    
Winpepi J. H. Abramson June 2008 No Proprietary GUI    
WPS Analytics World Programming March 2018 No Proprietary CLIGUI C, Assembler PythonRSAS and SQL languages
WINKS TexaSoft August 2013 No Proprietary GUI Fortran, Visual Basic  
XploRe MD*Tech 2006 No Proprietary GUI    
Product Developer Latest version Open source Software license Interface Written in Scripting languages

Operating system support

Product Windows Mac OS Linux BSD Unix Cloud
ADaMSoft Yes Yes Yes Yes Yes No
Alteryx Yes No No No No No
Analyse-it Yes No No No No No
BMDP Yes         No
Dataplot Yes Yes Yes Yes Yes No
ELKI Yes Yes Yes Yes Yes No
Epi Info Yes No No No No No
EViews Yes Yes No No No No
GAUSS Yes Yes Yes No Yes No
GraphPad Prism Yes Yes No No No No
gretl Yes Yes Yes Yes No No
JASP Yes Yes Yes No No browser
JMP Yes Yes Terminated No No No
LIMDEP Yes No No No No No
Maple Yes Yes Yes No Yes No
MATLAB Yes Yes Yes No No No
Mathematica Yes Yes Yes No Yes Yes
MaxStat Pro Yes No No No No No
MedCalc Yes No No No No Yes[9]
Minitab Yes Terminated No No No No
NCSS Yes Yes No No No No
NLOGIT Yes No No No No No
NMath Stats Yes No No No No No
NumXL Yes No No No No No
OpenEpi Yes Yes Yes Yes Yes No
Orange Yes Yes Yes Yes Yes No
Origin Yes No No No No No
Primer Yes No No No No No
PSPP Yes Yes Yes Yes Yes No
R Commander Yes[10] Yes[10] Yes[10] Yes[10] Yes No
R Yes Yes Yes Yes Yes Yes
RATS Yes Yes Yes No Yes No
RKWard Yes No Yes No Yes No
ROOT Yes Yes Yes Yes Yes No
SageMath Partial Yes Yes No Yes Yes
Salstat Yes Yes Yes Yes Yes No
SAS Yes Terminated Yes No Yes Yes
SciPy Yes Yes Yes Yes Yes No
SHAZAM Yes No No No No No
SigmaXL Yes Yes No No No No
SOCR Yes Yes Yes Yes Yes No
SOFA Statistics Yes Yes Yes Yes Yes No
SPlus Yes No Yes No Yes No
SPSS Yes Yes Yes No Yes Yes
Stata Yes Yes Yes No Yes No
StatCrunch Yes Yes Yes Yes Yes Yes
Statgraphics Yes No No No No No
Statistica Yes No No No No No
StatPlus Yes Yes No No No No
Statsmodels Yes Yes Yes Yes Yes No
SYSTAT Yes Terminated No No No No
TSP Yes Yes Yes Yes Yes No
UNISTAT Yes No No No No No
The Unscrambler Yes No No No No No
Winpepi Yes No No No No No
WPS Analytics Yes Yes Yes No Yes Yes
WINKS Yes No No No No No
XploRe Yes No Yes No Yes No
Product Windows Mac OS Linux BSD Unix SaaS

ANOVA

Support for various ANOVA methods

Product One-way Two-way MANOVA GLM Mixed model Post-hoc Latin squares
ADaMSoft Yes Yes No No No No No
Alteryx Yes Yes Yes Yes Yes    
Analyse-it Yes Yes No No Yes Yes No
BMDP Yes Yes Yes Yes Yes Yes  
Epi Info Yes Yes No No No No No
EViews Yes            
GAUSS   No No No   No No
GenStat Yes Yes Yes Yes Yes Yes Yes
GraphPad Prism Yes Yes No No   Yes No
gretl Yes            
JASP Yes Yes No        
JMP Yes Yes Yes Yes Yes Yes Yes
LIMDEP Yes Yes Yes Yes Yes No No
Maple Yes[11] No No No No No Yes[12]
Mathematica Yes Yes No[13] Yes   Yes No
MATLAB+Statistics Toolbox Yes Yes Yes Yes Yes Yes Yes
MaxStat Pro Yes Yes No No No Yes Yes
MedCalc Yes Yes No Yes   Yes No
Minitab Yes Yes Yes Yes   Yes Yes
NCSS Yes Yes Yes Yes Yes Yes Yes
NLOGIT Yes Yes Yes Yes Yes No No
NMath Stats Yes Yes No No   No No
Orange Yes No No No No No No
Origin Yes Yes No No Yes Yes No
PSPP Yes Yes No Yes   Yes Yes
R Yes Yes Yes Yes Yes Yes Yes
R Commander Yes Yes Yes Yes   Yes Yes
SageMath Yes Yes Yes   Yes Yes  
Salstat Yes No No No   No No
SAS Yes Yes Yes Yes Yes Yes Yes
SciPy Yes No No No No No No
SHAZAM Yes Yes No Yes Yes Yes No
SigmaXL Yes Yes No No     No
SOCR Yes Yes No No   Yes Yes
SOFA Statistics Yes No No No   No No
SPlus Yes Yes Yes Yes   Yes Yes
SPSS Yes Yes Yes Yes Yes Yes Yes
Stata Yes Yes Yes Yes Yes Yes Yes
StatCrunch Yes Yes No No No Yes No
Statgraphics Yes Yes Yes Yes Yes Yes Yes
Statistica Yes Yes Yes Yes   Yes Yes
StatPlus Yes Yes Yes Yes   Yes Yes
Statsmodels Yes Yes Yes Yes Yes Yes No
SYSTAT Yes Yes Yes Yes   Yes Yes
TSP No No No No   No No
UNISTAT Yes Yes No Yes   Yes Yes
The Unscrambler Yes No No No   No No
WINKS Yes Yes No Yes Yes Yes No
Winpepi Yes Yes No No   No No
WPS Analytics Yes Yes Yes Yes Yes Yes Yes
Product One-way Two-way MANOVA GLM Mixed model Post-hoc Latin squares

Regression

Support for various regression methods.

Product OLS WLS 2SLS NLLS Logistic GLM LAD Stepwise Quantile Probit Cox Poisson MLR
ADaMSoft Yes Yes No Yes Yes No No Yes          
Alteryx Yes Yes     Yes Yes   Yes   Yes      
Analyse-it Yes       Yes               Yes
BMDP Yes       Yes     Yes     Yes    
Epi Info Yes No No No Yes No No No     Yes    
EViews Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes   Yes Yes
GAUSS Yes       Yes Yes No   No     Yes  
GenStat Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes
GraphPad Prism Yes Yes No Yes No No No No No No   No Yes
gretl Yes Yes Yes Yes Yes No Yes Yes Yes Yes   Yes  
JMP Yes Yes No Yes Yes Yes No Yes In JMP Pro Yes In JMP Pro Yes Yes
LIMDEP Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes
Maple Yes Yes No Yes[14] No No No No No No No No Yes
Mathematica Yes Yes   Yes Yes[15] Yes[16] Yes[17]   Yes Yes[18] Yes[19] Yes Yes[20]
MATLAB+Statistics Toolbox Yes Yes Yes[21] Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes
MaxStat Pro Yes Yes   Yes Yes               Yes
MedCalc Yes Yes   Yes Yes     Yes   Yes Yes   Yes
Minitab Yes Yes No Yes Yes No No Yes No        
NCSS Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes
NLOGIT Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes
NMath Stats Yes Yes   Yes                 Yes
NumXL Yes         Yes   Yes         Yes
Orange Yes Yes No Yes Yes No No No No No No No Yes
Origin Yes Yes No Yes No No No No No No Yes No Yes
PSPP Yes                        
R Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes
R Commander[22] Yes         Yes     No        
RATS Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes   Yes Yes
SageMath Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes   Yes  
Salstat No No No No No No No No No No   No No
SAS Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes
SciPy Yes via "statsmodels" No Yes No No No Yes No via "statsmodels" No via "statsmodels" No
SHAZAM Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes
SigmaXL Yes       Yes               Yes
SOCR Yes No No No Yes No No No          
SPlus Yes     Yes Yes Yes   Yes Yes        
SPSS Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes
Stata Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes
StatCrunch Yes No No No Yes No No No No No No No Yes
Statgraphics Yes Yes No Yes Yes Yes No Yes Yes Yes Yes Yes Yes
Statistica Yes Yes Yes Yes Yes Yes Yes Yes No Yes Yes Yes Yes
StatPlus Yes No Yes Yes Yes Yes No Yes          
Statsmodels Yes Yes Yes Yes Yes Yes Yes No Yes Yes Yes Yes Yes
SYSTAT Yes Yes Yes Yes Yes Yes Yes Yes No        
TSP Yes Yes Yes Yes Yes No Yes No Yes Yes   Yes Yes
UNISTAT Yes Yes Yes Yes Yes Yes No Yes   Yes   Yes  
The Unscrambler Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes
WINKS Yes       Yes Yes   Yes         Yes
Winpepi Yes       Yes         Yes   Yes Yes
WPS Analytics Yes Yes   Yes Yes Yes   Yes   Yes Yes Yes Yes
Product OLS WLS 2SLS NLLS Logistic GLM LAD Stepwise Quantile Probit Cox Poisson MLR

Time series analysis

Support for various time series analysis methods.

Product ARIMA GARCH Unit root test Cointegration test VAR Multivariate GARCH
Alteryx Yes No        
Analyse-it            
EViews Yes Yes Yes Yes Yes Yes
GAUSS Yes Yes Yes   Yes Yes
GraphPad Prism No No No No No  
gretl Yes Yes Yes Yes Yes  
JMP Yes          
LIMDEP Yes Yes Yes Yes Yes No
Mathematica Yes[23] Yes Yes[24] Yes Yes[25] Yes[26]
MATLAB+Econometrics Toolbox Yes Yes Yes Yes Yes  
MaxStat Pro Yes No No No No No
MedCalc No No No No No  
Minitab Yes No No No No  
NCSS Yes          
NLOGIT Yes Yes Yes Yes Yes No
NumXL Yes Yes Yes Yes    
NMath Stats            
Orange Yes No No No Yes No
Origin No No No No No No
PSPP            
R Yes Yes Yes Yes Yes Yes
R Commander[22]            
RATS Yes Yes Yes Yes Yes Yes
SageMath Yes Yes Yes Yes Yes Yes
Salstat No No No No No No
SAS Yes Yes Yes Yes Yes Yes
SciPy via "statsmodels" No via "statsmodels" No via "statsmodels" No
SHAZAM Yes Yes Yes Yes Yes No
SOCR No No No No No  
Stata Yes Yes Yes Yes Yes Yes
Statgraphics Yes No No No No  
Statistica Yes No No No No  
StatPlus Yes No No No No  
SPlus   Yes     Yes  
SPSS Yes Yes        
Statsmodels Yes No Yes Yes Yes No
SYSTAT Yes          
TSP Yes Yes Yes Yes Yes No
UNISTAT Yes No No No No  
WINKS Yes No No No No  
Winpepi            
WPS Analytics Yes   Yes      
Product ARIMA GARCH Unit root test Cointegration test VAR Multivariate GARCH

Charts and diagrams

Support for various statistical charts and diagrams.

Chart Bar chart Box plot Correlogram Histogram Line chart Scatterplot
ADaMSoft Yes Yes Yes Yes Yes Yes
Alteryx Yes Yes   Yes Yes Yes
Analyse-it Yes Yes Yes Yes Yes Yes
BMDP       Yes   Yes
ELKI No No No Yes Yes Yes
Epi Info Yes No No Yes Yes Yes
EViews Yes Yes Yes Yes Yes Yes
GAUSS Yes Yes   Yes Yes Yes
GenStat Yes Yes Yes Yes Yes Yes
GraphPad Prism Yes Yes Yes Yes Yes Yes
gretl Yes Yes Yes Yes Yes Yes
JMP Yes Yes Yes Yes Yes Yes
LIMDEP Yes Yes Yes Yes Yes Yes
Maple Yes[27] Yes[28] Yes[29] Yes[30] Yes[31] Yes[32]
Mathematica Yes[33] Yes[34] Yes[35] Yes[36] Yes[37] Yes[38][39]
MATLAB+Statistics Toolbox Yes Yes Yes Yes Yes Yes
MaxStat Pro Yes Yes Yes Yes Yes Yes
MedCalc Yes Yes Yes Yes Yes Yes
Minitab Yes Yes Yes Yes Yes Yes
NCSS Yes Yes Yes Yes Yes Yes
NLOGIT Yes Yes Yes Yes Yes Yes
NMath Stats            
NumXL     Yes Yes    
Orange Yes Yes Yes Yes Yes Yes
Origin Yes Yes No Yes Yes Yes
PSPP            
R Yes Yes Yes Yes Yes Yes
R Commander            
RATS Yes Yes Yes Yes Yes Yes
SageMath Yes Yes Yes Yes Yes Yes
SAS Yes Yes Yes Yes Yes Yes
SciPy Yes Yes No Yes Yes Yes
SHAZAM Yes Yes Yes Yes Yes Yes
SigmaXL Yes Yes   Yes Yes Yes
SOCR Yes Yes Yes Yes Yes Yes
SOFA Statistics Yes Yes No Yes Yes Yes
SPlus            
SPSS Yes Yes Yes Yes Yes Yes
Stata Yes Yes Yes Yes Yes Yes
StatCrunch Yes Yes No Yes Yes Yes
Statgraphics Yes Yes Yes Yes Yes Yes
Statistica Yes Yes Yes Yes Yes Yes
StatPlus Yes Yes Yes Yes Yes Yes
Statsmodels Yes Yes Yes Yes Yes Yes
SYSTAT            
TSP No No Yes Yes Yes Yes
UNISTAT Yes Yes Yes Yes Yes Yes
The Unscrambler Yes     Yes Yes Yes
WINKS Yes Yes Yes Yes Yes Yes
Winpepi         Yes Yes
WPS Analytics Yes Yes Yes Yes Yes Yes

Other abilities

Product s/w

type

[Note 1]
Descriptive statistics Nonparametric statistics Quality

control
Survival

analysis
    Data processing
Base

stat.[Note 2]
Normality

tests[Note 3]
CTA[Note 4] Nonparametric

comparison, ANOVA
Cluster

analysis
Discriminant

analysis
BDP[Note 5] Ext.[Note 6]
ADaMSoft S + + + + - - + + + +
Alteryx S + + + + + + + + + +
Analyse-it X + + + + + - - - + +
BMDP   + + + +   + + +    
Epi Info S + - + + - + - - + +
Gauss St + + - - - - - - + +
GenStat St + + + + + + + + + +
GraphPad Prism S + + - + - + - - - -
Gretl S + + + + - + - - + +
JMP S + + + + + + + + + +
LIMDEP S + + + + - - + + + +
Maple S + +[40]     +[41] - - - + +
Mathematica S + + + + - +[42] + - + +
MATLAB+Statistics Toolbox S + + + + + + + + + +
MaxStat Pro S + + + +   - - - + +
MedCalc S + + + + + + - - + +
Minitab S + + + + + + + + + +
NCSS S + + + + + + + + + +
NLOGIT S + + + + - - + + + +
NMath Stats S + + - - - - + - - -
NumXL X + + - - - - - - - +
OpenEpi S + - + - - - - - - -
Orange S + + + + + - + + + +
Origin S + + - + - + + + + +
PSPP S + +                
R St + + + + + + + + + +
RATS   + + - - - - - - + +
SAS S + + + + + + + + + +
SciPy St + + - + - - - - + +
SHAZAM S + + - - - - - - + +
SigmaXL X + + + + + +     + +
SOCR S + + + + - + + - + +
SOFA Statistics S   - + + - - - - - -
Stata S + + + + + + + + + +
StatCrunch C + + + + + - - - + +
Statgraphics S + + + + + + + + + +
Statistica S + + + + + + + + + +
StatPlus S + + + + + + - - + +
SPlus St + + + + + + + + + +
SPSS S + + + + + + + + + +
Statsmodels St + + + - - + - - + +
SYSTAT S + + + + + + + + + +
TSP S + + - - - - - - + +
UNISTAT S + + + + + + + + + +
The Unscrambler S + +   +     + +    
WINKS S + + + + + +     + +
Winpepi S + + + + - + + - - -
WPS Analytics S + + + +   + + + + +
Product s/w

type

[Note 1]
Descriptive statistics Nonparametric statistics Quality

control
Survival

analysis
    Data processing
Base

stat.[Note 2]
Normality

tests[Note 3]
CTA[Note 4] Nonparametric

comparison, ANOVA
Cluster

analysis
Discriminant

analysis
BDP[Note 5] Ext.[Note 6]

See also[edit]

原文:https://en.wikipedia.org/wiki/Comparison_of_statistical_packages

本文:https://pub.intelligentx.net/wikipedia-comparison-statistical-packages

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Wikipedia Comparison of statistical packages

【首席架构师推荐】计算代数系统列表

Chinese, Simplified

下表提供了计算机代数系统(CAS)的比较。CAS是一个包,包含一组算法,用于对代数对象执行符号操作,一种语言来实现它们,以及使用该语言的环境。CAS可以包括用户界面和图形功能;要想有效,可能需要大量的算法库、高效的数据结构和一个快速的内核

General

System Creator Development started First public release Latest stable version Latest stable release date Cost (USD) License Notes
Axiom Richard Jenks 1977 1993 and 2002[7]   August 2014[8] Free modified BSD license General purpose CAS. Continuous Release using Docker Containers
Cadabra Kasper Peeters 2001 2007 2.2.0 29 March 2018 Free GNU GPL CAS for tensor field theory
CoCoA John Abbott, Anna M. Bigatti, Giovanni Lagorio 1987 1995 5.2.0 2 May 2017 Free GNU GPL Specialized CAS for commutative algebra
Derive Soft Warehouse 1979 1988 6.1 November 2007 Discontinued Proprietary CAS designed for pocket calculators; it was discontinued in 2007
Erable (aka ALGB) Bernard Parisse, Mika Heiskanen, Claude-Nicolas Fiechter 1993 1993 4.20060919 21 April 2009 Free LGPL CAS designed for Hewlett-Packard scientific graphing calculators of the HP 48/49/40/50 series; discontinued in 2009
Fermat Robert H. Lewis 1986 1993 6.21 13 July 2018 $70 if grant money available, otherwise $0 GNU GPL Specialized CAS for resultant computation and linear algebra with polynomial entries
FORM J.A.M. Vermaseren 1984 1989 4.2 6 July 2017[9] Free GNU GPL CAS designed mainly for particle physics
FriCAS Waldek Hebisch 2007 2007 1.3.5 3 February 2019 Free modified BSD license Full-featured general purpose CAS. Especially strong at symbolic integration.
GAP GAP Group 1986 1986 4.9.3 5 September 2018 Free GNU GPL[10] Specialized CAS for group theory and combinatorics.
GiNaC Christian Bauer, Alexander Frink, Richard B. Kreckel, et al. 1999 1999 1.7.5 17 February 2019 Free GNU GPL Integrate symbolic computation into C++ programs; no high-level interface, but emphasis on interoperability.
KANT/KASH KANT Group ? ? 3 2005/2008 Free for non-commercial use own license Specialized CAS for algebraic number theory
Macaulay2 Daniel Grayson and Michael Stillman 1992 1994 1.14 2019 Free GNU GPL Specialized CAS for algebraic geometry and commutative algebra
Macsyma MIT Project MAC and Symbolics 1968 1978 2.4 1999 $500 Proprietary The oldest general purpose CAS. Still alive as Maxima.
Magma University of Sydney ~1990 1993 2.22-3 20 July 2016 $1,440 Proprietary General purpose CAS, originally specialized in group theory. Works with elements of algebraic structures rather than with non typed mathematical expressions
Magnus The New York Group Theory Cooperative 1994 1997   2005 Free GNU GPL Specialized CAS for group theory providing facilities for doing calculations in and about infinite groups. Discontinued in 2005.
Maple Symbolic Computation Group, University of Waterloo 1980 1984 2019.1 (May 28, 2019; 3 months ago) [±][11] 14 March 2019 $2,390(Commercial), $2,265 (Government), $995 (Academic), $239 (Personal Edition), $99 (Student), $79 (Student, 12-Month term)[12] Proprietary One of the major general purpose CAS
Mathcad Parametric Technology Corporation 1985 1985 15.0 M045 November 2015 $1,600 (Commercial), $105 (Student), Free (Express Edition)[13] Proprietary Numerical software with some CAS capabilities
Mathematica Wolfram Research 1986 1988 12.0.0 (April 16, 2019; 5 months ago) [±][14] 16 April 2019 $2,495 (Professional), $1095 (Education), $295 (Personal),[15] $140 (Student), $69.95 (Student annual license),[16] free on Raspberry Pi hardware[17] Proprietary One of the major general purpose CAS
Mathomatic George Gesslein II 1986 1987 16.0.5 2012 Discontinued LGPL Elementary algebracalculuscomplex number and polynomial manipulations.
Maxima MIT Project MAC and Bill Schelter et al. 1967 1998 5.42.0 22 January 2019 Free GNU GPL General purpose CAS. Continuation of Macsyma; new releases occur two times a year.
MuMATH Soft Warehouse 1970s 1980 MuMATH-83   Discontinued Proprietary Predecessor of Derive
MuPAD SciFace Software 1989 2008 5.1 2008 Discontinued Proprietary MathWorks has incorporated MuPAD technology into Symbolic Math Toolbox
OpenAxiom Gabriel Dos Reis 2007 2007 1.4.2 2013 Free modified BSD license General purpose CAS. A fork of Axiom.
PARI/GP Henri Cohen, Karim Belabas, Bill Allombert et al. 1985 1990 2.11.0 18 July 2018 Free GNU GPL Specialized CAS for number theory.
Reduce Anthony C. Hearn 1960s 1968   2018 Free modified BSD license Historically important general purpose CAS. Still alive, as open-sourced and freed in December 2008
Scilab Scilab Enterprises 1990 1990 6.0.2 14 February 2019 Free CeCILL (GPL-compatible) Matlab alternative.
SageMath William A. Stein 2005 2005 8.8 27 June 2019[18] Free GNU GPL Mathematics software system combining a number of existing packages, including numerical computationstatistics and image processing
SINGULAR University of Kaiserslautern 1984 1997 4-1-2 25 March 2019 Free GNU GPL Computer algebra system for polynomial computations, with special emphasis on commutative and non-commutative algebraalgebraic geometry, and singularity theory.
SMath Studio Andrey Ivashov 2004 2006 0.99.6839 22 September 2018 Free Proprietary Mathematical notebook program similar to Mathcad.
Symbolic Math Toolbox (MATLAB) MathWorks 1989 2008 9.4(2018a) 2018 $3,150 (Commercial), $99 (Student Suite), $700 (Academic), $194 (Home) including required Matlab Proprietary Provides tools for solving and manipulating symbolic math expressions and performing variable-precision arithmetic.
SymPy Ondřej Čertík 2006 2007 1.4 10 April 2019 Free modified BSD license Python-based
TI-Nspire CAS (Computer Software) Texas Instruments 2006 2009 3.1.0.392     Proprietary Successor to Derive. Based on Derive's engine used in TI-89/Voyage 200 and TI-Nspire handheld
Wolfram Alpha Wolfram Research   2009   2013 Pro version: $4.99 / month, Pro version for students: $2.99 / month, ioRegular version: free Proprietary Online computer algebra system with step-by step solutions.
Xcas/Giac Bernard Parisse 2000 2000 1.2.3 January 2017 Free GPL General CAS, also adapted for the HP Prime. Compatible modes for Maple, MuPAD and TI89 syntax. Symbolic spreadsheets, Giac library for use with other programs. ARM ports for some PDAs with Linux or WinCE[19]
Yacas Ayal Pinkus et al. 1998[20] 1999 1.7.0 26 June 2019 Free GNU GPL  
  Creator Development started First public release Latest stable version Latest stable release date Cost (USD) License Notes

These computer algebra systems are sometimes combined with "front end" programs that provide a better user interface, such as the general-purpose GNU TeXmacs.

Functionality

Below is a summary of significantly developed symbolic functionality in each of the systems.

System Formula editor Arbitrary precision Calculus Solvers Graph theory Number theory Quantifier elimination Boolean algebra Tensors Probability Control theory Coding theory Group theory System
Integration Integral transforms Equations Inequalities Diophantine equations Differential equations Recurrence relations
Axiom No Yes Yes Yes Yes Yes Yes Yes Yes No Yes Yes Yes Yes Yes No No Yes Axiom
Cadabra No Yes Yes Yes Yes Yes No Yes No No No No No Yes No No No Yes Cadabra
FriCAS Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes No No Yes FriCAS
Magma No Yes No No Yes No Yes No No Yes Yes No No No ? ? Yes Yes Magma
Magnus No Yes No No No No No No No ? ? No ? No No No No Yes Magnus
Maple Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes No Yes Yes Yes Yes No Yes Maple
Mathcad Yes No Yes No Yes No No No No No No No No No No No No No Mathcad
Mathematica Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes[21] Yes Yes No Yes Mathematica
Mathomatic No No Yes Yes Yes No No No No No Yes No No No No No No No Mathomatic
Symbolic Math Toolbox (MATLAB) Yes Yes Yes Yes Yes Yes Yes Yes No Yes Yes No Yes No Yes Yes No No Symbolic Math Toolbox (MATLAB)
Maxima No Yes Yes Yes Yes Yes No Yes Yes Yes Yes No Yes Yes Yes Yes No Yes Maxima
SageMath No Yes Yes Yes Yes Yes Yes[A] Yes Yes Yes Yes Yes[B] Yes Yes Yes No Yes Yes SageMath
SMath Studio Yes No Yes No Yes No No No No No No No No No No No No No SMath Studio
SymPy No Yes Yes Yes Yes Yes Yes[22] Yes Yes No Yes No Yes Yes Yes No No Yes SymPy
Wolfram Alpha Pro version only Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes No ? ? No Yes Wolfram Alpha
GAP No Yes No No Yes Yes Yes No Yes Yes Yes Yes Yes Yes No No Yes Yes GAP
Xcas/Giac Yes Yes Yes No Yes Yes No Yes Yes No Yes No No No Yes ? No ? Xcas/Giac
Yacas No Yes Yes No Yes No No No No No No No No No ? ? No No Yacas
Reduce No Yes Yes ? Yes Yes ? Yes ? ? Yes Yes Yes Yes ? ? ? ? Reduce
  1. ^ via SymPy
  2. ^ via qepcad optional package
 

Those which do not "edit equations" may have a GUI, plotting, ASCII graphic formulae and math font printing. The ability to generate plaintext files is also a sought-after feature because it allows a work to be understood by people who do not have a computer algebra system installed.

Operating system support

The software can run under their respective operating systems natively without emulation. Some systems must be compiled first using an appropriate compiler for the source language and target platform. For some platforms, only older releases of the software may be available.

System DOS Windows macOS Linux BSD Solaris Android iOS SaaS Other
Axiom ? Emulator Yes Yes No No ? ? No  
Cadabra No Yes Yes Yes Yes No No No No  
CoCoA No Yes Yes Yes Yes Yes ? ? No Tru64 UNIXHP-UXIRIX
Derive Yes Yes No No No No ? ? No  
Erable No Emulator Emulator Emulator No No No No No System RPL on HP 48/49/50/40 series
Euler ? Yes No Yes No No ? ? No  
Fermat ? Cygwin Yes Yes No No ? ? No  
FORM ? Cygwin Yes Yes Yes Yes ? ? No  
FriCAS ? Cygwin+native Yes Yes Yes Yes ? ? No  
GAP ? Yes Yes Yes Yes Yes ? ? No  
KANT/KASH ? Yes Yes Yes No No ? ? No  
Macaulay2 ? Cygwin Yes Yes Yes Yes ? ? No  
Magma ? Yes Yes Yes Yes Yes ? ? No  
Magnus No Yes ? Yes ? Yes No No No SunOs
Maple No Yes Yes Yes No No No No No  
Mathcad Yes Yes No No No No No No No  
Mathematica No Yes Yes Yes No No No No Yes Raspberry Pi[17]
Mathomatic Yes Yes Yes Yes Yes Yes No Yes No All POSIX platforms
Maxima ? Yes Yes Yes Yes Yes Yes ? No All POSIX platforms with Common Lisp
MuMATH Yes No No No No No ? ? No  
OpenAxiom ? Yes Yes Yes Yes Yes ? ? No  
PARI/GP ? Yes Yes Yes Yes Yes Yes ? No  
Reduce ? Yes Yes Yes Yes Yes ? ? No  
SageMath No Yes Yes Yes No Yes No Yes Yes  
SINGULAR ? Yes Yes Yes Yes Yes ? ? No  
SMath Studio No Yes Mono Mono Mono Mono Yes Yes Yes Universal Windows Platform
SymbolicC++ ? Yes Yes Yes Yes Yes ? ? No  
Symbolic Math Toolbox (MATLAB) No Yes Yes Yes No No No No Yes  
SymPy ? Yes Yes Yes Yes Yes Yes Yes Yes[23] Any system that supports Python
TI-Nspire (desktop software) No Yes Yes No No No No Yes No  
Xcas/Giac No Yes Yes Yes Yes Yes Yes Yes No HP Prime CASKhiCAS for TI Nspire
Yacas No Yes Yes Yes Yes Yes ? ? No  

Graphing calculators

Some graphing calculators have CAS features.

System Creator Development started First public release / OS version Latest stable version / OS version Notes
Casio CFX-9970G CASIO Computer Co. ? 1998    
Casio Algebra FX 2.0 CASIO Computer Co. ? 1999    
Casio ClassPad 300Casio ClassPad 300 PlusCasio ClassPad 330Casio ClassPad 330 PlusCasio ClassPad fx-CP400

Casio ClassPad Manager
CASIO Computer Co. 2002 2003 3.10.7000 ClassPad Manager is an emulator which runs on a PC.
HP 49GHP 49g+HP 48gIIHP 50gHP 40GHP 40gs Hewlett-Packard 1993 1.??(1999) / 4 2.15 (2006-09-19, 2009-04-21) / 4 Based on Erable, which is also available as an add-on for the HP 48SHP 48SXHP 48GHP 48G+HP 48GX. Intended for problems which occur in engineering applications. Source code openly available.
HP Prime Hewlett-Packard 2000 2013 6975 (2014-12-03) / v1.1.0-46 (2014-03-31) Based on Xcas/Giac. Source code openly available.
TI-89 Texas Instruments 1995 1996 2.09  
TI-89 Titanium Texas Instruments 2003 2004 7/18/2005 v3.10  
TI-92 Texas Instruments 1994 1995 ?  
TI-92 Plus Texas Instruments 1997 1998 3/27/2003 v2.09  
TI-Nspire CASTI-Nspire CX CAS Texas Instruments 2006 2008 2014 v3.6.0.550  
Voyage 200 Texas Instruments 2001 2002 7/18/2005 v3.10  

 

See also

 

原文:https://en.wikipedia.org/wiki/List_of_computer_algebra_systems

本文:https://pub.intelligentx.net/wikipedia-list-computer-algebra-systems

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